You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    DIGging Into Data and getting the credit
    Presentation on using and adapting OER data-centric resources

    Keywords: data2019 QUBES/BioQUEST Summer Workshopdata-centric teachingoer life cycle

    1487

    views

    330

    downloads

    0

    comments

    0

    adaptations

    NEON data in undergraduate ecology courses: Data skills and learning opportunities
    Presentation made by Wendy Gram et al. as part of the "Bringing Research Data to the Ecology Classroom: Opportunities, Barriers, and Next Steps” Session at the Ecological Society of America...

    Keywords: Ecological Society of AmericaNEONNational Ecological Observatory Network

    1034

    views

    162

    downloads

    0

    comments

    0

    adaptations

    Data is the New Science
    In this module, students will be introduced to some emerging biodiversity data resources. They will be asked to think critically about the strengths and utility of these data resources and apply...

    Keywords: data in the classroombiodiversity informaticsnatural history collection

    3179

    views

    1225

    downloads

    0

    comments

    2

    adaptations

    Supplemental Materials for Beagle Investigations Return with Darwinian Data Manuscript
    Supplement 1 contains an example laboratory exercise for introducing the BIRDD resources. Supplement 2 contains a list of web accessible data resources to supplement the existing BIRDD resources.

    Keywords: Galapagosdata on darwins finches

    1495

    views

    210

    downloads

    0

    comments

    0

    adaptations

    RNAseq data analysis using Galaxy
    This is a bioinformatics exercise intended for use in a computer lab setting with life science majors.

    Keywords: LabbioinformaticsNCBImappingUndergraduateworkflowNIBLSEGalaxyRNAseqgene expressionAdvancedExtended ProjectArabidopsisC1. Role of bioinformaticsC2. Computational conceptsC3. Statistical conceptsC5. Data retrievalIncubated at NIBLSEdifferentially expressed genes

    1341

    views

    199

    downloads

    0

    comments

    0

    adaptations

    R Subsetting Tutorial
    The students will practice manipulating data to add to or extract subsets of specific values, rows, columns, or subsets of data contained in existing data files.
    1052

    views

    452

    downloads

    0

    comments

    0

    adaptations

    Exploring Data with BISON
    A module to explore aggregated observation and collection information, through BISON, or Biodiversity Information Serving Our Nation (https://bison.usgs.gov), a tool for visualizing GBIF data.

    Keywords: Querying databasesdata in the classroombiodiversity informaticsnatural history collectionsGBIFBISON

    1813

    views

    575

    downloads

    0

    comments

    0

    adaptations

    REMNet Tutorial, Excel Part 2: Understanding Your Microbiome “Data Summary” Document 4.25.19
    Video on understanding microbiome data from the Research Experiences in Microbiomes Network
    839

    views

    329

    downloads

    0

    comments

    0

    adaptations

    Morphological, Anatomical and Molecular Analysis of Plant Phylogeny and Diversity
    In this lab, students perform phylogenetic analyses on morphological, anatomical and molecular data, and compare.

    Keywords: morphologyphylogenylaboratoryplantsmolecular analysisstele architecture

    1098

    views

    602

    downloads

    0

    comments

    0

    adaptations

    Data from: Agent-based and Individual-based Modeling: A Practical Introduction, Chapter 5, Exercise 10 [Elevation]
    Supplemental data for ABM

    Keywords: elevationChapter 5exercise

    811

    views

    156

    downloads

    0

    comments

    0

    adaptations

    Using primary literature to teach data literacy
    Presentation by Bridget Conneely made as part of the "Bringing Research Data to the Ecology Classroom: Opportunities, Barriers, and Next Steps” Session at the Ecological Society of American...

    Keywords: Ecological Society of America

    1196

    views

    343

    downloads

    0

    comments

    0

    adaptations

    BEDE - Biological and Environmental Data Education Network: Preparing Instructors to Integrate Data Science into Undergraduate Biology and Environmental Science Curricula (RCN-UBE Introduction)
    The Biological and Environmental Data Education Network (BEDE Network) develops and shares teacher-training workshops, curricular designs, teaching modules, and best practices to help integrate...

    Keywords: computational toolsdata scienceRCN-UBE Introduction

    415

    views

    88

    downloads

    0

    comments

    0

    adaptations

    Machine Learning Meets Medicine with Jenessa Peterson
    Jenessa Peterson is a former teacher turned data scientist/engineer and Director of Learning Engineering at The Learning Agency. Her more recent work in data science has included building a...

    Keywords: data sciencemachine learningmedicine

    343

    views

    75

    downloads

    0

    comments

    0

    adaptations

    2019 EDSIN Conference Proceedings
    Bringing Conversations on Diversity and Inclusion in Data Science to the Ecological and Environmental Sciences, was a 3-day conference hosted at the UCAR's Center Green in Boulder, Colorado, April...

    Keywords: data scienceEquityenvironmental sciencediversityinclusionconference proceedingsEnvironmental Data Science Inclusion Network

    911

    views

    223

    downloads

    0

    comments

    0

    adaptations

    Analyzing current and past climate data (Project EDDIE)
    Students analyze current and past temperature and CO2 data to relate current climate change to climate of the past 450,000 years. Objectives: Are global temperatures and CO2 levels rising? How...
    1647

    views

    1021

    downloads

    0

    comments

    0

    adaptations

    An Introduction to Biodiversity Databases and Specimen Images
    In this module, students will be introduced to some biodiversity data resources and how to search for and download herbarium specimen images. They will be asked to think critically about the...

    Keywords: data in the classroombiodiversity informaticsnatural history collection

    1556

    views

    583

    downloads

    0

    comments

    0

    adaptations

    Earth Analytics in R Course
    Earth analytics is an advanced, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of...

    Keywords: data analysisdatadata typesdata visualizationdata scienceearth scienceR programming languageremote sensingGeographic Information System (GIS)data science educationcomputer programmingwildfireearth analytics

    1324

    views

    346

    downloads

    0

    comments

    0

    adaptations

    Earth Analytics Bootcamp Course
    The Earth Analytics Bootcamp is a three-week introductory-level course taught by instructors in Earth Lab and is a part of the Professional Certificate in Earth Data Analytics - Foundations at CU...

    Keywords: data analysisdatadata typesdata visualizationdata scienceearth sciencepythonremote sensingGeographic Information System (GIS)data science educationdcomputer programmingwildfireearth analytics

    1247

    views

    345

    downloads

    0

    comments

    0

    adaptations

    REMNet Tutorial, R Part 2: Importing Your Microbiome Data into R 5.3.19
    Video on importing data into R from the Research Experiences in Microbiomes Network

    Keywords: growth mindsetVideoMicrobiology EducationR programming languagemicrobiomesmath attitudesResources @ BIOMAAPmistakesvalue of mistakesresearch in the classroomREMNeturban microbiomes

    1165

    views

    401

    downloads

    0

    comments

    0

    adaptations

    Biobyte 4 - The role of data science principles and practices in undergraduate biology
    This short activity was an effort to launch a community conversation around the interface of data science principles and practices and undergraduate biology education. A variety of resources,...

    Keywords: biostatisticsstatistical analysisavian malariaSummer Workshop 2018

    953

    views

    540

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search