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    R for biologists
    An introductory guide to data analysis in R for life sciences researchers.

    Keywords: R

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    Mapping Coral Bleaching Modified with NOAA and Authentic Bleaching data
    Students access NOAA data to conduct an analysis to look at differences between locations in heat stress and ultimately the amount of coral bleaching in 2005

    Keywords: ecologyBiodiversityclimateScientific ProcessStatistics and Mathecosystemsearth and environmenthuman impacts

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    Data-Driven Decision-Making: Antarctic Fisheries
    This is an entire module for a general education data science and ecology course. The module was originally designed as the fourth and final section of the course; the full course is openly...

    Keywords: population growthRStudiodata visualizationexponential growthlogistic growthR Markdownspatial dataocean sustainability4DEE FrameworkTraditional ecological knowledgecarrying capacityEcosystem Servicesmaximum sustainable yield

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    1-078-MonodGrowthModel-ModelingScenario
    Students model growth of bacteria E. coli in a limiting nutrient environment using data from a historical study.

    Keywords: bacterianutrient cyclesgrowthMonodconsumption

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    Module 4: What Kind of Data Goes in a Field Notebook?
    The goal of this activity is to introduce students to biological field notebooks and how they are used by scientists during field work. Specifically, students will learn what a botanist collecting...

    Keywords: Herbarium digitizationField notebookTimothy Plowman

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    Mapping New Discoveries: iNaturalist and Biodiversity Data
    Meet Lauren Esposito, the Curator of Arachnology at the California Academy of Sciences. Learn how they use community science to inform new species discovery.

    Keywords: endangered species#iNaturalistBiodiversity data usage

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    5-024-PhGreatLakes
    In this teaching modeling scenario, we demonstrate how lessons on salt-tank compartmental modeling can be used to predict phosphorus levels in the Great Lakes.

    Keywords: Great Lakeslimnologycomparmentpollutioncompartmental modelsphosphorous

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    2001-Knisley-Kerley-Using data to motivate the models used in introductory differential equations
    In this paper, the data itself is used to motivate mathematical models in introductory mathematics courses. In doing so, various regression and optimization techniques are illustrated.

    Keywords: regressionlogisticTorricelli's Lawgrowthperiodic process

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    3-013-WhiffleBallFall-ModelingScenario
    We are given data on the time and position of a whiffle ball as it falls to the ground. We attempt to model the falling ball and we confront the different resistance terms and models.

    Keywords: Akaike Information CriterionresistancegravityFree Body Diagramforcefalling objectWhiffle ball

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    3-041-UpDown-ModelingScenario
    Shoot a projectile straight up in the air. Determine maximum height the projectile will go. Consider time T(a) (0 < a < 1) it takes between when the projectile passes distance a.H going up and...

    Keywords: gravityprojectile motionfalling bodymaximum heightftiming

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    Lichens in Diverse Landscapes: EREN-NEON Flexible Learning Project
    This project makes use of publicly-available datasets on lichen presence and abundance and wet deposition, paired with geospatial data on air quality, tree canopy cover, and locally collected field...

    Keywords: NEONNational Ecological Observatory Network

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    Lichens in Diverse Landscapes: EREN-NEON Flexible Learning Project
    This project makes use of publicly-available datasets on lichen presence and abundance and wet deposition, paired with geospatial data on air quality, tree canopy cover, and locally collected field...

    Keywords: NEONNational Ecological Observatory Network

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    Plate Tectonics: GPS Data, Boundary Zones, and Earthquake Hazards (Project EDDIE)
    Students work with high precision GPS data to explore how motion near a plate boundary is distributed over a larger region and hypothesize the area over which boundary-related earthquake hazards...
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    Lichens in Diverse Landscapes: EREN-NEON Flexible Learning Project
    This project makes use of publicly-available datasets on lichen presence and abundance and wet deposition, paired with geospatial data on air quality, tree canopy cover, and locally collected field...

    Keywords: NEONNational Ecological Observatory Network

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    Introduction to R with Biodiversity Data
    Students will learn R basics while downloading biodiversity data from multiple data repositories. This module will walk students through installing R, navigating R,writing reproducible scripts in...
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    Lichens in Diverse Landscapes: EREN-NEON Flexible Learning Project
    This project makes use of publicly-available datasets on lichen presence and abundance and wet deposition, paired with geospatial data on air quality, tree canopy cover, and locally collected field...

    Keywords: NEONNational Ecological Observatory Network

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    Setting Up Nonparametric Tests
    This swirl lesson will show you how to rearrange your data within R from one that shows a multiple factor design (2 x 2) to a single factor (4 levels) to allow for data analyses that require...
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    Diversity, Equity, and Inclusion in Ecology: Introducing the Environmental Data Science Inclusion Network (EDSIN)
    The Environmental Data Science Inclusion Network (EDSIN) was launched in the spring of 2019 following an NSF INCLUDES conference. This poster, summarizing the event, was presented at the 2019...

    Keywords: data scienceEquitydiversityinclusionNational Ecological Observatory NetworkEDSIN#edsin2019

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    Graphing grouped continuous data in R with swirl
    This lesson helps students know some of the options for how to graph grouped continuous data (such as those involved in doing a t-test or ANOVA) and how to choose the best option.

    Keywords: biostatisticsR programming languageSwirl

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    Electronic Lab Notebooks: Options for Building Data Management and Quantitative Reasoning Skills
    Presentation on Electronic Notebooks and Lab Archives given at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: 2019 QUBES/BioQUEST Summer Workshopelectronic notebookselectronic lab notebookslab archives

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