You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    A Critical Guide to the UniProtKB Flat-file Format
    This Critical Guide briefly presents the need for biological databases and for a standard format for storing and organising biological data.

    Keywords: NIBLSEuniprotGOBLETInstructorResources

    909

    views

    233

    downloads

    0

    comments

    0

    adaptations

    GEA Introductory lesson on BLAST
    The "Introduction to BLAST using Human Leptin" exercise aims to introduce students to the use of the Basic Local Alignment Search Tool (BLAST) to identify related sequences and compare similarity...

    Keywords: geneticsProbabilitydatabasebioinformaticsphylogenetic analysisgenomicsBLASTProtein sequenceSimilarity searches

    1473

    views

    1210

    downloads

    0

    comments

    0

    adaptations

    Using Synthetic Biology to Teach Data Science
    Poster and supplemental materials on using synthetic biology to introduce students to meaningful data mining, analysis, and application to engineering novel biological constructs.
    1036

    views

    786

    downloads

    0

    comments

    0

    adaptations

    Behavioral Genetics: Investigating the genes of a complex phenotype in fruit flies
    Introductory genetics laboratory published as GSA Learning Resource

    Keywords: behaviorbioinformaticsNIBLSEdrosophilagenetic basisfruit fliesmodel organism

    1573

    views

    364

    downloads

    0

    comments

    0

    adaptations

    Exploring the City of Biofilms: An Engaging Analogy-Based Activity for Students to Learn Biofilms
    Multicellular biofilms constructed by microbes are key aspects of microbiology with significant implications in various fields, including medicine, environmental science, and biotechnology. While...

    Keywords: bacteriaBiofilmsquorum sensing

    6080

    views

    209

    downloads

    0

    comments

    0

    adaptations

    Community Conversation: OER for Diversity, Equity and Inclusion in STEM Classrooms
    Follow the link to the webinar video, "OER for Diversity, Equity and Inclusion in STEM Classrooms". In this conversation, bringing in Diversity, Equity, and Inclusion to the classroom was discussed...
    1133

    views

    460

    downloads

    0

    comments

    0

    adaptations

    The Evolution (and Coevolution) of Flowering Plants
    Module on coevolution developed by AIM-UP. In the module students utilize natural history collections.

    Keywords: moduleResources @ AIM-UP!Coevolutionpollination biologynatural history collections

    2872

    views

    923

    downloads

    1

    comments

    0

    adaptations

    Modification to City Parks
    Using a jigsaw approach, students calculated species richness, Shannon's diversity index and species evenness using the City Parks wildlife data.

    Keywords: Biodiversityspecies diversity

    1894

    views

    694

    downloads

    0

    comments

    0

    adaptations

    Central Dogma, Dictionaries, and Functions: Using Programming Concepts to Simulate Biological Processes
    Technologies like next-generation sequencing, proteomics, and high-throughput phenotyping have transformed the way we do biology. There is a continued need for scientists with computational skills...

    Keywords: computationpythonJupyter notebookFunctionscentral dogmaDictionaries

    1104

    views

    143

    downloads

    0

    comments

    0

    adaptations

    2016-Rob_deBoer-Population Dynamics  A Graphical Approach
    This book is an introduction into modeling population dynamics in ecology. Because there are several good textbooks on this subject, the book needs a novel ecological niche to justify its existence.

    Keywords: mathematical modelstabilitycompetitionSIRbifurcationconsumptionpopulation population dynamicsgeneral replicationnonlinear density dependenciesfunctional responsepersistencephase plan analysis

    177

    views

    56

    downloads

    0

    comments

    0

    adaptations

    Causes and consequences of resisting herbivory: How long-lived plants avoid damage from diverse short-lived insect herbivores
    This module guides students through decades-long studies of tropical plant-insect interactions to elucidate the ecology and evolution of plant defenses while encouraging students to consider the...
    885

    views

    84

    downloads

    0

    comments

    0

    adaptations

    MS Excel Refresher - Lizards, iguanas, and snakes! Oh my! | Data Nuggets
    This resource, a MS Excel refresher, extends the level for this Data Nugget. Students are given an Excel workbook with the data and asked to graph and calculate diversity using Excel functions...

    Keywords: Resources @ Data NuggetsspreadsheetsRestoration EcologyUsing Excelgraphing in Excelformulas in ExcelApplied ecology

    577

    views

    312

    downloads

    0

    comments

    0

    adaptations

    Biodiversity, Big Data, and the Fossil Record
    In this lab, we will be making and testing hypotheses about how the biodiversity of groups of organisms may vary through time.

    Keywords: digital resourcesnatural history museumspaleobiology

    2559

    views

    353

    downloads

    0

    comments

    0

    adaptations

    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    Practice module included in Teaching Issues and Experiments in Ecology (TIEE) Volume 10

    Keywords: data analysisResources @ ESA - TIEEclimate changephenologyspecies diversityproblem setWorksheet

    1754

    views

    658

    downloads

    0

    comments

    0

    adaptations

    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    The module was used in lab following lecture material on pairwise interactions in ecology (emphasizing consumption, competition, mutualism), and parallel to community ecology (emphasizing food web...

    Keywords: Resources @ ESA - TIEEclimate changephenologyspecies diversityproblem set

    1545

    views

    2726

    downloads

    0

    comments

    0

    adaptations

    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    Practice module included in Teaching Issues and Experiments in Ecology (TIEE) Volume 10

    Keywords: Resources @ ESA - TIEEclimate changephenologyspecies diversityproblem set

    3291

    views

    540

    downloads

    0

    comments

    15

    adaptations

    Green Design: How do Leaf Structures Optimize Photosynthesis and Promote Survival?
    One of the major learning objectives established by the American Society of Plant Biologists and the Botanical Society of America has students answer the question: How do plant structures enable...

    Keywords: photosynthesisepidermal layerleaf anatomymesophyllpalisade parenchymaplant anatomyplant structure functionspongy parenchymaStomata

    2331

    views

    701

    downloads

    0

    comments

    0

    adaptations

    You and Your Oral Microflora: Introducing non-biology majors to their “forgotten organ”
    With limited time available for laboratory activities, introductory science courses for non-science majors typically use the laboratory period to reinforce material that was previously presented...

    Keywords: bacteriamicrobiomeBLASTmicrobesDNA replicationPolymerase chain reaction (PCR)

    2235

    views

    276

    downloads

    0

    comments

    0

    adaptations

    Tackling "Big Data" with Biology Undergrads: A Simple RNA-seq Data Analysis Tutorial Using Galaxy
    Analyzing high-throughput DNA sequence data is a fundamental skill in modern biology. However, real and perceived barriers such as massive file sizes, substantial computational requirements, and...

    Keywords: bioinformaticsDNA sequenceRNAseqgene expression

    4775

    views

    879

    downloads

    0

    comments

    0

    adaptations

    SEAS CURE: Exploring Coral Biology Across Scales
    Complex biological concepts (like symbiosis and coral biology) that span multiple scales and cross disciplinary boundaries are often difficult for students to understand. This complexity is...

    Keywords: microscopyAnatomySymbiosisMetabolismbleachinginvertebratedinoflagellate

    3441

    views

    252

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search