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    Lesson VI - The Community Science Project
    Genome Solver's Community Science Project was developed as a way to use the skills taught in the previous lessons. We're asking members of the community to provide instances of potential phage...

    Keywords: Bioinformatics EducationBioinformatics and Genomics

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    GEA Introductory lesson on RNA-Seq
    This RNA-Seq lesson uses the CyVerse VICE Platform and Jupyter notebooks to examine the expression of the leptin gene in samples from a mouse experimental design evaluating diet (high-fat vs....

    Keywords: data sciencebioinformaticsGenome BrowserRNAseqhigh throughput sequencingmRNAAlignmentNCBI Sequence Read Archive

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    Cell Signaling Pathways - a Case Study Approach
    Signaling and gene expression are fundamental to cell biology and developmental biology. Although these topics are highly interrelated, they typically appear in separate units in a course. We use a...

    Keywords: signal transductiongene expressionCell communicationgenetic disordersregulation of enzyme activity

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    Plant-microbial mutualisms in canopy gap recovery: How do soil microbial symbionts help tropical forests recover from treefall gaps?
    This module uses tropical plant-soil microbial interactions in canopy gaps as a lens to better understand species interactions and disturbance ecology, while showing how scientists study these...

    Keywords: forest ecologyPlant Ecologynutrient cyclingmicrobestropical forestsDisturbances

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    Between a rock and a hard place. What can turning rocks tell us about land-use change impacts on animals living in a rock outcrop?
    Unique rock outcrops in the Western Ghats biodiversity hotspot in India provide a setting that challenges students to develop a study to assess the impact of land-use change on threatened animals...

    Keywords: conservationagricultureland useamphibianstropicalbiodiversity losslateritic outcropopen natural ecosystemsreptilesrocks

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    Ocean Acidification: Predator-Prey Interactions of Intertidal Snails and Sea Stars
    This lesson discusses ocean acidification, its causes, and the potential dangers that it may pose to aquatic ecosystems by analyzing the relationship between intertidal invertebrates. While...

    Keywords: predator-prey interactionsocean acidification

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    Restoring tropical forests: Implementing an online module about restoration and succession in an advanced undergraduate ecology course
    “Restoring tropical forests” was implemented, using restoration as an example of variation in successional pathways, in an undergraduate course at Arizona State University. New versions of the...

    Keywords: resourcesimplementationRestorationtropical forestssuccession

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    Population Genetics: Limits to Adaptation
    This module introduces gene flow in the context of understanding the persistence of maladaptive traits in some populations. It is intended for an introductory biology audience.

    Keywords: LogarithmsAlgebraGenetics and Evolution

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    The impact of diet and antibiotics on the gut microbiome
    The goal of this article is to describe an active learning exercise that can be used in a variety of advanced microbiology courses, including bacterial physiology, ecology, or systems biology. The...

    Keywords: microbiomeenvironmental controlhost responsemetabolites

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    Analysis of Microbiomes Using Free Web-Based Tools in Online and In-Person Undergraduate Science Courses
    Our understanding of microbiomes, or the collection of microorganisms and their genes in a given environment, has been revolutionized by technological and computational advances. However, many...

    Keywords: microbiomeDNA SubwayCyVerseCourse based undergraduate researchQIIME2ranacapa

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    Garden Variety Mutations: Using Primary Data to Understand the Central Dogma in Large-Lecture Introductory Biology
    The ability to interpret and create an argument from data is a crucial skill for budding scientists, yet one that is seldom practiced in introductory courses. During this argumentation module,...

    Keywords: mutationtranscriptiongene expressioncentral dogmatranslationgel electrophoresisGenotype/Phenotype

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    Healing the scars: Implementing an online module about tropical rainforest carbon cycling in an undergraduate majors ecology course
    This resource provides a guide to classroom implementation of a Gala module focused on tropical carbon cycling. I adapted the module to include a discussion of the importance of carbon cycling in...

    Keywords: carbon cyclestreamstropical

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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    This is an FMN participant modification of the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America,"...

    Keywords: ecologyIntroductoryfmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelActivity LengthMore than 1 hour

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    Teaching notes for "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America"
    This is an FMN participant modification of the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America,"...

    Keywords: ecologyLabfmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    This is an FMN participant modification of the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America,"...

    Keywords: ecologyIntroductoryLabfmnUndergraduateData DiscoveryInstructional SettingAudience LevelActivity LengthMore than 1 hour

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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    This is an FMN participant modification of the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America,"...

    Keywords: ecologyLabfmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

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    Using a long-term data set from Ohio to analyze climate change and it’s impacts on phenology and ecological interactions
    This is an FMN participant modification of the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America,"...

    Keywords: ecologyIntroductoryfmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelActivity Length1 Hour

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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    This is an FMN participant supplement for the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America," authored...

    Keywords: ecologyLabEcological Society of AmericafmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelActivity LengthMore than 1 hour

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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    This is an FMN participant modification of the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America,"...

    Keywords: ecologyLabEcological Society of AmericafmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthExtended Project

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    The Science Behind the ACTN3 Polymorphism
    A common polymorphism in the alpha-actinin-3 (ACTN3) gene results in the lack of ACTN3 protein expression in fast twitch muscle fibers in ~16% of the human population (1). This genetic change has...

    Keywords: protein structure and functionhuman genetic variationskeletal muscle physiology

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