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Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Java while loop demo, investment case
    BigJava Chapter 6, UTC, CPSC1100 Fall 2017

    Keywords: javabioinformaticsgenomicsyoutubeBig Javainvestment case

    1116

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    255

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    Java String substring usage, initials
    CPSC1100 Fall 2017, UTC. Big Java Chapter 4.

    Keywords: videosjavabioinformaticsgenomicsyoutubeJava String

    1176

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    294

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    0

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    UNR Bioinformatics Videos
    Two videos developed by Pedro Miura about bioinformatics at UNR

    Keywords: videosbioinformaticsgenomicsyoutube

    1048

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    116

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    Northern Processing
    Using photoshop and illustrator from tif file to make a figure

    Keywords: videosbioinformaticsgenomicsnorthern processingphotoshopillustrator

    1019

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    204

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    0

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    Aging and Circular RNAs
    A science FIT seminar presented to incoming freshmen at UNR

    Keywords: videosbioinformaticsRNAaginggenomicsyoutubecircular rna

    1128

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    251

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    0

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    Using Jetstream for Bioinformatics
    A pre-class screencast for UCSD’s Foundations of Bioinformatics course (BGGN-213).

    Keywords: videosbioinformaticsgenomicsyoutubescreen castjetstream

    1003

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    215

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    NCBI Overview
    An overview of some of the databases within NCBI and how to get FASTA sequences.

    Keywords: videosbioinformaticsFASTAgenomicsNCBIyoutube

    1026

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    190

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    UniProt
    Brief description of UniProt and its databases and features

    Keywords: videosbioinformaticsgenomicsyoutubeuniprot

    1197

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    209

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    0

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    GSEAtheory
    Brief introduction to how gene set enrichment analysis works.

    Keywords: videosbioinformaticsgenomicsyoutubegsea

    1291

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    238

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    What is bioinformatics?
    Short description of what bioinformatics is, it's potential applications, and what it is not.

    Keywords: videosbioinformaticsgenomicsintroductionyoutube

    1047

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    220

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    0

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    UNVEIL-ing Framework to Summer Research Experiences
    Undergraduate research opportunities help foster a science identity and increase retention in STEM majors and transition into the STEM workforce. Moreover, these opportunities have stronger results...
    1850

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    579

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    0

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    Adapting InTeGrate Materials for Online Courses
    As part of my second mentoring of the InTeGrate FMN for QUBES, I chose to focus on my conversion of several resources to an online course format.
    1152

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    430

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    0

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    Temperature Change in the 21st Century in North America
    This is an FMN participant modification of the TIEE module "Global Temperature Change in the 21st Century," authored by Daniel R. Taub and Gillian S. Graham in 2011.

    Keywords: ecologyLabEcological Society of AmericafmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthExtended Project

    1764

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    266

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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    This is an FMN participant modification of the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America,"...

    Keywords: ecologyLabEcological Society of AmericafmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

    1837

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    279

    downloads

    0

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    adaptations

    Exploring the population dynamics of wintering bald eagles through long-term data
    This is an FMN participant modification of the TIEE module "Exploring the population dynamics of wintering bald eagles through long-term data" authored by Julie Beckstead, Alexandra N....

    Keywords: ecologyLabEcological Society of AmericafmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

    1724

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    256

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    0

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    Using Open-Source Bioinformatics and Visualization Tools to Explore the Structure and Function of SARS-CoV-2 Spike Protein
    The relationship between protein structure and function is a foundational concept in undergraduate biochemistry. We find this theme is best presented with assignments that encourage exploration and...

    Keywords: bioinformaticsmolecular modelingCOVID19protein structure and functionUCSF ChimeraSARS-CoV-2 spike proteinACE2 receptor

    3509

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    372

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    0

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    adaptations

    Mol* Adaptation: Case of Severe Insulin Resistance
    This is an adaptation using Mol* on the original case written. This case focuses on understanding how a mutation in a cell signalling protein (a kinase) can prevent insulin function and lead to...

    Keywords: molecular visualization and analysisPDBMolecular Case Studyinsulin resistanceMol*MolStar

    854

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    148

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    Phylogeny of Land Plants
    In this lab, students review the characteristics of the major land plant lineages. Then they perform phylogenetic analyses based on morphological characters.

    Keywords: morphologyphylogenylaboratoryplantsmolecular analysis

    1233

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    934

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    ICABL: An Inclusive Community for the Assessment of Biochemistry and Molecular Biology (BMB) Learning (RCN-UBE Introduction)
    ICABL is an inclusive and collaborative community that supports the professional development of biochemistry and molecular biology scientist-educators committed to the enhancement of student...

    Keywords: RCN-UBE Introduction

    485

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    83

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    0

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    2012-Brian_Ingalls-Mathematical Modelling in Systems Biology An Introduction
    This is a comprehensive text with much biology background to motivate the mathematical modeling, exercises and answers, and many rich examples.

    Keywords: spatialsensitivity analysisgene regulatory networksstochasticbifurcationmetabolic networkselectrophysiologytransductionrate lawsbiochemical reactions

    361

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    78

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    0

    comments

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