You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    The ODD protocol: A review and first update
    The ‘ODD’ (Overview, Design concepts, and Details) protocol was published in 2006 to standardize the published descriptions of individual-based and agent-based models (ABMs).

    Keywords: agent-based modelabmstandardizationODD protocolModel descriptionModel formulationScientific communicationChapter 3model replic

    1068

    views

    566

    downloads

    0

    comments

    0

    adaptations

    Marriage age model ODD
    Supplemental resource from ABM

    Keywords: case studytextbookNetLogoagent-based modelingIndividual & Agent Based ModelingODD protocol

    1169

    views

    210

    downloads

    0

    comments

    0

    adaptations

    ODD Description of the BEFORE Beech Forest Model
    This is a supplemental resource from ABM

    Keywords: case studytextbookNetLogoagent-based modelingODD protocol

    1249

    views

    222

    downloads

    0

    comments

    0

    adaptations

    Mock Drug Activity Enhances Student Learning About the Challenges of HIV/AIDS Therapy
    While traditional didactic coursework is important for learning about the scientific aspects of HIV/AIDS, it is difficult to convey social aspects of the epidemic. Due to effective drug therapies,...

    Keywords: drug resistanceRetrovirusViral replication

    1236

    views

    167

    downloads

    0

    comments

    0

    adaptations

    MTT Assay Video Protocol
    This assay works great. However, the cells are killed during the course of the assay. If you want cells to remain alive use the Alamar Blue assay.

    Keywords: MTT Assay

    106

    views

    39

    downloads

    0

    comments

    0

    adaptations

    Marriage Model (with errors)
    Marriage age model for use with NetLogo and ABM material

    Keywords: computational modelagent-based modelsocial networksmarriageChapter 6Chapter 6.5

    1138

    views

    327

    downloads

    6

    comments

    0

    adaptations

    SEAS CURE: Exploring Coral Biology Across Scales
    Complex biological concepts (like symbiosis and coral biology) that span multiple scales and cross disciplinary boundaries are often difficult for students to understand. This complexity is...

    Keywords: microscopyAnatomySymbiosisMetabolismbleachinginvertebratedinoflagellate

    3550

    views

    263

    downloads

    0

    comments

    0

    adaptations

    DataCamp
    DataCamp: The Easiest Way to Learn Data Science Online

    Keywords: statisticsRcurriculumdata visualizationdata scienceonline learningcoursemachine learningpythonlab protocol

    1376

    views

    1430

    downloads

    0

    comments

    0

    adaptations

    2018-Mohammed_Kaabar-A_Friendly_Introduction_to_Differential_Equations
    In this book, there are five chapters: Laplace Transform, Systems of Homogeneous Linear Differential Equations, Methods of First and Higher Orders DEs, Extended Methods of First and Higher Orders...

    Keywords: textbookordinary differential equations

    190

    views

    63

    downloads

    0

    comments

    0

    adaptations

    EREN PFPP Species Composition Curriculum Module with Data
    In this lab, students will learn foundational concepts of forest community dynamics and apply quantitative skills to data analysis and interpretation activities. Students will use tree plot data...

    Keywords: forest ecologyecologydata analysisdata in the classroomCommunity Ecologyscience educationcourse-based undergraduate research experiencecurriculum materialsPlant EcologyPlant community assemblyCollaborative researcheren

    1925

    views

    241

    downloads

    0

    comments

    0

    adaptations

    An Interactive Protocol for In-Classroom DNA Extraction
    Using commonly available materials, this tool allows students to extract DNA, exploring DNA chemistry and the principles of experimental design and execution. We take a “Choose Your Own...

    Keywords: geneticsDNAbiochemical structure and function

    2547

    views

    211

    downloads

    0

    comments

    0

    adaptations

    Polyploidapalooza: Exploring the diversity and evolution of polyploid plants and animals
    This series of modules explores the complex world of polyploidy, including species formation, cell division, evolution, conservation, and economic importance. We focus on polyploidy across the...

    Keywords: Evolutionconservationnatural historyCell DivisionhybridizationPolyploidygenome duplicationallopolyploidyautopolyploidy

    395

    views

    410

    downloads

    0

    comments

    0

    adaptations

    Cell Culture Best Practices: Getting Started
    These video resources show how to get started working in the lab.

    Keywords: beginnerchemical hygiene and lab safety

    6

    views

    5

    downloads

    0

    comments

    0

    adaptations

    Hemocytometer and Counting Cells Cell Block
    This resource describes how to count cells using a hemocytometer.

    Keywords: lab protocolcounting cells

    73

    views

    17

    downloads

    0

    comments

    0

    adaptations

    OpenIntro
    OpenIntro was started with one goal in mind: create a free and open-source introductory textbook.

    Keywords: statisticssimulationvideosmodulerandomizationtextbookcurriculumlabsproblem setslecture slidescoursein-class activitylab protocolproblem setPresentation

    1291

    views

    246

    downloads

    0

    comments

    0

    adaptations

    Putting specimens on the map: An introduction to georeferencing
    Use GEOLocate to assign geographic coordinates to natural history collections specimens

    Keywords: mappingnatural history collectionscourse-based research experiences (CUREs)digitized natural history collectionsgeoreferencing

    1672

    views

    1445

    downloads

    0

    comments

    0

    adaptations

    Drawing flowcharts of lab protocols helps students prepare for biology labs
    With the publishing of the Vision and Change report, we know it is best practice to include authentic research experiences in our undergraduate science lab classes. One big challenge in teaching...

    Keywords: laboratorymolecular biologyUndergraduateprotocolflowchart

    5094

    views

    457

    downloads

    0

    comments

    0

    adaptations

    2010-Bruce-Conrad-Ordinary_Differential_Equations_A_Systems_Approach
    This is an author posted second edition to the text which was originally published by Prentice Hall in 2003.

    Keywords: differential equationstextbook

    152

    views

    48

    downloads

    0

    comments

    0

    adaptations

    Setting up PC12 Differentiation Assay Cell Block
    How to conduct a differentiation assay using PC12 cells. Complete video protocol.

    Keywords: neurobiologycourse-based research experiences (CUREs)neuorscienceCell culture-based researchPC12

    173

    views

    13

    downloads

    0

    comments

    0

    adaptations

    Migration Assay Protocol
    Migration is a key property of live cells and critical for normal development, immune response, and disease processes such as cancer metastasis and inflammation.

    Keywords: migration assay

    67

    views

    21

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search