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    Leaf cutter ant foraging
    This module introduces students to leaf-cutter ants in the rainforests of Panama. Students derive their own research hypotheses regarding ant foraging or allometric scaling relationships.

    Keywords: leaf cutter antsforagingallometrylinear regressiongraphingdata visualizationResources @ AIMSbody size

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    Have fish assemblages recovered from the legacy of acid rain?
    This module provides a framework for upper-level ecology students to learn about limiting factors for stream fish diversity, using data from Shenandoah National Park and gaining skills in...

    Keywords: Problem based learningdiversitycooperative learninglimiting factorsaquatic ecosystemspyramid examlab reports

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    Grow the Gradient: An interactive countercurrent multiplier game
    The countercurrent multiplier of the loop of Henle in a mammalian kidney is a challenging concept for instructors to teach and for students to learn. We developed an interactive game to support...

    Keywords: countercurrent multiplierexcretory systemkidneyloop of Henlemembrane transport

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    Fragile States: A Case Study Exploring Genetics, Molecular Biology, and Biochemistry Through the Lens of Fragile X Syndrome
    This case aims to strengthen students’ understanding of molecular biology concepts through study of Fragile X Syndrome (FXS). Students begin by learning the cause and phenotypes of FXS and...

    Keywords: gene regulationtranscriptiontranslationFragile X syndrometriplet repeat expansionsex linkagemetabolic pathway

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    A Muscular Dystrophy Case Study Illustrating the Phenotypic Effects of Mutation
    Mutations in genes can lead to a variety of phenotypes, including various human diseases. Students often understand that a particular mutation in a single gene causes a disease phenotype, but it is...

    Keywords: mutationProtein Structureethicscentral dogmahuman disease

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    The Avocado Lab: An Inquiry-Driven Exploration of an Enzymatic Browning Reaction
    Typical biochemistry labs exploring basic enzyme activity rely on costly, time-consuming protein purification and rarely explore enzyme function in situ. Further, complex purification procedures...

    Keywords: enzymescontrolsenzyme inhibition

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    2014-Robert_Terrell-Notes_on_Differential_Equations
    We point out that the title is not Solving Differential Equations; we derive them, discuss them, review calculus background for them, apply them, sketch and compute them, and also solve them and...

    Keywords: octaveengineeringtextsbook

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    2014-Enderling-Chaplain-Mathematical Modeling of Tumor Growth and Treatment
    Herein we describe fundamentals of mathematical modeling of tumor growth and tumor-host interactions, and summarize some of the seminal and most prominent approaches.

    Keywords: cancertumor modelingangiogenesistumor growthpatient care

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    2006-G_Ashline-J_Ellis-Monaghan-How high-fast-long-Modeling water rocket flight with calculus
    We describe an easy and fun project using water rockets to demonstrate applications of single variable calculus concepts.

    Keywords: calculusFlightprojectilewater rocket

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    1975-DH_Griffel-Teaching the formation and solution of differential equations
    This paper raises many interesting questions about teaching the formation (and solution) of differential equations, i.e. modeling with differential equations.

    Keywords: parasitesTopographypopulationepidemictraffic flowsocial interactionsfish weightarms race

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    2004-Mark_McCartney-Using_second-order_ordinary_differential_equations_to_model_traffic_flow
    A simple mathematical model for how vehicles follow each other along a stretch of road is presented. The resulting linear second-order differential equation with constant coefficients is...

    Keywords: differential equationstraffic flowvehicle followsecond order

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    2018-Mohammed_Kaabar-A_Friendly_Introduction_to_Differential_Equations
    In this book, there are five chapters: Laplace Transform, Systems of Homogeneous Linear Differential Equations, Methods of First and Higher Orders DEs, Extended Methods of First and Higher Orders...

    Keywords: textbookordinary differential equations

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    1-102-CancerTumor-ModelingScenario
    This module guides students in the use of differential equation models to predict cancer growth and optimize treatment outcomes. Several classical models for cancer growth are studied, including ...

    Keywords: optimizationlogisticpredictiondata fittingpower lawGompertzcancer growtheponentialBertalanaffy

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    Generating Biological Hypotheses in a "Course-based Undergraduate Research Experience"(CURE) Course
    Hypotheses are often incorrectly defined as educated guesses or if/then statements. Further confusion arises from the fact that not all disciplines define hypotheses similarly. The difficulty in...

    Keywords: scientific methodHPT axisNeural stem cells

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    Fruit Fly Genetics in a Day: A Guided Exploration to Help Many Large Sections of Beginning Students Uncover the Secrets of Sex-linked Inheritance
    Moving beyond the basic concepts of autosomal Mendelian inheritance to sex-linkage can be difficult for introductory biology students. Although crosses with Drosophila fruit flies have long been a...

    Keywords: Mendelian Geneticsfruit fly biologysex-linked inheritance

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    Module M.8 Survival analysis
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

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    1-104A-T-InfectionRisk-ModelingScenario
    This project is designed to examine differences between the exponential and logistic growth models in biology and how to apply these models in solving epidemic questions and comparing to actual...

    Keywords: regressioninfectionCOVID19carrying capacitylogistic equationexponential model

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    2018-David_Bourne-Pharmacokinetics – Source Material
    This is a rich source of pharmacokinetics modeling activities and data. These are syllabus notes with homework assignments listed.

    Keywords: boluspharmacokineticspharmacodynamicdrug distribution

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    2008-Lawson-Marion-An Introduction to Mathematical Modelling
    This is a broad based set of notes with sections: Building Models, Studying Models, and Using Models. No depth on any model, no solution strategies, but good references to models, and general...

    Keywords: time serieslinear regressionAkaike Information Criterionmcomparision models

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    Aquatic Macroinvertebrates and Urbanization: Exploring urbanization’s effect on leaf litter decomposition in six streams of Puerto Rico using R
    Urbanization effects stream ecosystems by introducing pollutants to the streams.. This has detrimental effects on the life of the streams such as the aquatic macroinvertebrates who are in charge of...

    Keywords: aquatic macroinvertebratesStream ecologyurbanizationsurban runoff

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