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    Digital Herbarium Lab with RStudio: Are shifting abundances of native species detectable over time?
    This 2- to 3-hour lab activity introduces sophomore-level students to digitized herbarium collections, R-coding, and potential reasons for shifting abundances in native and non-native plant species...

    Keywords: data analysistool:rstudionatural historyplant biologyinvasive plantsherbariumnative plantsdigitized natural history collectionsR code

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    Antigen presentation and cytotoxic T lymphocytes (CTLs): elucidating a common roadblock for students
    Active learning resource for pre-Nursing anatomy and physiology lecture explaining antigen presentation to CTLs and how the CTLs recognize and destroy the pathogen using Biointeractive animations...

    Keywords: Resources @ HHMI - BioInteractiveimmune systemAnatomy & PhysiologyCell communication

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    Grow the Gradient: An interactive countercurrent multiplier game
    The countercurrent multiplier of the loop of Henle in a mammalian kidney is a challenging concept for instructors to teach and for students to learn. We developed an interactive game to support...

    Keywords: countercurrent multiplierexcretory systemkidneyloop of Henlemembrane transport

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    You and Your Oral Microflora: Introducing non-biology majors to their “forgotten organ”
    With limited time available for laboratory activities, introductory science courses for non-science majors typically use the laboratory period to reinforce material that was previously presented...

    Keywords: bacteriamicrobiomeBLASTmicrobesDNA replicationPolymerase chain reaction (PCR)

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    Bringing Pasteur Back to Life: Studying the Biochemistry of Yeast Fermentation Through Discussion Groups and an At-Home Lab
    This hands-on, student-centered biochemistry lesson introduces beginner biochemistry students to the techniques of effectively reading and discussing primary literature, identifying fundamental...

    Keywords: primary literatureexperimentationyeastMetabolismFermentationRespirationequilibrium

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    Data Management in Excel and R using National Ecological Observatory Network's (NEON) Small Mammal Data
    Students use small mammal data from the National Ecological Observatory Network to understand necessary steps of data management from data collection to data analysis by re-organising excel sheets...

    Keywords: codingR Markdowndata managementggplot2spreadsheetssmall mammals community dynamicsNEONResource TypeNational Ecological Observatory NetworkR softwaredplyr

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    CURE-all: Large Scale Implementation of Authentic DNA Barcoding Research into First-Year Biology Curriculum
    Growing calls in science education reform have emphasized wide-scale engagement of first-year undergraduate students in authentic research experiences; however, large course enrollments, inadequate...

    Keywords: phylogeneticsbioinformaticsBiodiversityprocess of sciencetaxonomyPCRDNADNA sequencegel electrophoresis

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    A Close-Up Look at PCR
    The Polymerase Chain Reaction (PCR) is a fundamental laboratory technique that allows for the amplification of many copies of a desired DNA target sequence. Despite its prevalence, undergraduate...

    Keywords: PCRDNA replication

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    Moths and Frogs and E. coli, Oh My!: Agent-based Modeling of Evolutionary Systems
    In evolution classrooms, introducing and reinforcing the idea of genetic drift and random selection can be challenging, as can be reinforcing appropriate mental models of evolution. Agent-based...

    Keywords: modelingEvolutionecologyagent-based modelingGenetic Driftenvironmental scienceNatural Selectioncompetitive coevolutionsimulation modelingevolutionary reasoning

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    Student-Driven Design-and-Improve Modules to Explore the Effect of Plant Bioactive Compounds in Three Model Organisms
    Engaging and supporting introductory level students in authentic research experiences during required coursework is challenging. Plant bioactive compounds attract students' natural curiosity as...

    Keywords: statisticsLabCUREInquiryresearch skillscaterpillardaphniadrugsscience process

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    Visits to the writing center and office hours provide students structured reflection and low-stakes feedback on scientific writing in an Introductory Biology course
    Effective written communication of scientific concepts is a critical, but difficult skill for undergraduate STEM majors to acquire. Oftentimes, the grades of lab reports are negatively impacted by...

    Keywords: scientific writingwater qualityanalysis of results

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    Build-a-Genome Lab Manual for RFP Synthesis
    This lab manual describes a multi-week lab project for the design, assembly from oliognucleotides, cloning, and sequencing of the RFP gene. This resource was developed as part of NSF Award...
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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    This is an FMN participant supplement for the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America," authored...

    Keywords: ecologyLabEcological Society of AmericafmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelActivity LengthMore than 1 hour

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    Design Your Own Flow Cytometry Experiment: A Four-Week Inquiry Laboratory
    Due to its importance to the field, flow cytometry should be one of the hallmark methods a student learns in the lab portion of an undergraduate immunology course. Flow cytometry is a classic lab...

    Keywords: Immunologyexperimental designFlow cytometryMice

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    Assessing Socioeconomic Trends in Tree Cover and Human Health in Urban Environments
    In this exercise, students use a combination of publicly available data and tree cover data that they generate using iTree Canopy to test whether tree cover is equitably distributed within the city...

    Keywords: social justiceSimple Linear Regressionenvironmental justiceGeographic Information System (GIS)Using ExcelConnection to PlaceredliningEcosystem Servicesurban tree coverurban environments

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    Altruism Simulation Activity
    An altruism activity that uses a NetLogo altruism simulation.

    Keywords: Evolutiontool:netlogoanimal behavioraltruism

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    Glycolysis Can Be Fun: Rediscovering Glycolysis as a Problem-Solving Introduction to Metabolism
    A thorough understanding of glycolysis forms a foundation for students to analyze subsequent topics in metabolism, a core competency recognized by multiple national societies for biology and...

    Keywords: Problem based learningPOGILenzymesGlycolysisMetabolismFermentationchemical reactionsCard sorting activityCofactors

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    MS Excel Refresher - Lizards, iguanas, and snakes! Oh my! | Data Nuggets
    This resource, a MS Excel refresher, extends the level for this Data Nugget. Students are given an Excel workbook with the data and asked to graph and calculate diversity using Excel functions...

    Keywords: Resources @ Data NuggetsspreadsheetsRestoration EcologyUsing Excelgraphing in Excelformulas in ExcelApplied ecology

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    Teaching Exponential and Logistic Growth in a Variety of Classroom and Laboratory Settings
    Experiment included in Teaching Issues and Experiments in Ecology (TIEE) Volume 9

    Keywords: Resources @ ESA - TIEEpopulation growth

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    Dynamic Daphnia: An inquiry-based research experience in ecology that teaches the scientific process to first-year biologists
    This authentic research experience lesson teaches the core concept of systems and the competencies of quantitative reasoning, communication, and the ability to apply science. The research is...

    Keywords: statisticsecologyscientific methodexperimental designAbiotic and Biotic FactorsDependent and Independent Variables

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