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    Final Project for Calling Bull
    This is the final project for the calling bull course & it is to find 3 pieces of misinformation/BS and debunk them. They have to re-do at least one visualization, use R in at least one debunking,...

    Keywords: statisticsinformation literacycalling bulleportfolio

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    REMNet Tutorial, Excel Part 6: Making Microbiome Column Charts 5.3.19
    Video on creating column charts in Excel from the Research Experiences in Microbiomes Network

    Keywords: ExcelVideoMicrobiology Educationmicrobiomesresearch in the classroomREMNeturban microbiomes

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    EvolSeq
    An Excel worksheet that simulates the molecular evolution of DNA sequences.

    Keywords: EvolutionExcelmolecular evolutionDNAResources @ ESTEEM

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    Biogeography of plant-associated fungi: who lives where and why?
    This dataset of fungal communities associated with the leaves an endemic Hawaiian tree provides students opportunities to explore relationships between environmental variables and microbial...

    Keywords: small group activityinquiry-based learningbiogeographymicrobial ecology

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    Thinking deeply about quantitative analysis: Building a Biologist's Toolkit
    Vision and Change in Undergraduate Biology Education encouraged faculty to focus on core concepts and competencies in undergraduate curriculum. We created a sophomore-level course, Biologists'...

    Keywords: Vision and ChangeRRStudioquantitative literacystatistical analysisScientific communication

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    Calling Bullshit DCS 105 Bates College Breakout Group Slides
    This is a slide deck containing all breakout group slides for the course DCS 105 - Calling Bullshit at Bates College.

    Keywords: Ropenteam workgroup workslidescolabDCS 105Calling Bullshit

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    Calling Bullshit Bates College DCS 105 RByte Slides
    This slide deck is a mix of in-class participation and coding activities which aims to formalize understanding of code.

    Keywords: RIntroductorybatescolabDCS 105Calling Bullshit

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    2012-Ogunrinde-Sunday-On some models based on second order differential equation
    This paper presents some models based on second order differential equations. Such models include interaction between different kinds of species in an environment and pricing policy for optimum...

    Keywords: species interactionpricing policyoptimal inventory

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    1991-JR_Lobry-P_Flandois-Comparison of Monod's Growth Model Parameters from the Same Data Set
    The paper obtains the parameters in Monod's Growth model using a minimization of the sum of square errors with a given data set and obtains confidence intervals

    Keywords: Confidence intervalssum of square errorslinearizationgrowthModo Growth model

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    2018-Chris McCarthy-Newtons Law of Cooling
    You have hot water (initial temperature ) in a container, say a cup or glass. The temperature in the room is cooler, say a constant degrees Celsius. Come up with a differential equation that models...

    Keywords: datawaterNewton's Law of Coolingcooling

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    2012-R_B_Ogunrinde-J_Sunday-On_some_models_based_on_second_order_differential_equations
    This paper presents some models based on second order differential equations. This is a very straightforward article with good explanations of modeling assumptions.

    Keywords: combatcombat modelspecies interaction

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    Pesticide-Driven Bee Mortality: An Introduction to Survival Analysis in R
    In this lesson, students will receive an introduction to survival analysis in R utilizing data on bee mortality caused by pesticide exposure. In their code, students will assess survivability,...

    Keywords: chi-squaredsurvivalbeespesticidesRoundupsurvival analysissurvival plotsherbicides

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    Aquatic Macroinvertebrates and Urbanization: Exploring urbanization’s effect on leaf litter decomposition in six streams of Puerto Rico using R
    Urbanization effects stream ecosystems by introducing pollutants to the streams.. This has detrimental effects on the life of the streams such as the aquatic macroinvertebrates who are in charge of...

    Keywords: aquatic macroinvertebratesStream ecologyurbanizationsurban runoff

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    Science Sprints for Undergraduate Research Days
    After participating in the 2021 Science Sprint working group, I planned and executed a one-day Science Sprint focused on exploring urban ecology and social and environmental justice. Specifically,...

    Keywords: Science Sprint

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    1-124-WorldPopulation-ModelingScenario
    We build models of world population using data to estimate growth rate.

    Keywords: population dynamicshumangrowth ratevarying growth rate

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    Water We Doing: A Deep Dive Into Sustainable Ocean Management & Blue Economies
    This lesson explores the concept of blue economies and includes a detailing lesson in R that involves basic statistics and building complex graphics.

    Keywords: linear regressionRStudioblue economy

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    Statistics with epidemiology of COVID-19
    Introduction into heat maps, non-parametric t-test and GIF (optional) in R using an original dataset on COVID-19 infections from different counties of New Jersey, USA. Suitable for students who...

    Keywords: Rundergraduate educationheat mapsCOVID19coronavirusSARS-CoV-2GIF

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    The Human Microbiome Biodiversity in Health and Disease
    The students will analyze the human gut and vaginal microbiomes in healthy and diseased states using diversity of bacteria as determined by 16SrRNA sequence.
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    Using Natural History Collection Data in Your CURE: BLUE BIOME 2020
    This is the report for the BLUE working group from the Biome Institute 2020. It reflects our group's efforts and products related to CUREs and Natural History Collection Digital Data.

    Keywords: digitized natural history collectionsBIOME 2020Biodiversity Literacy in Undergraduate Education

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    Basic Statistics
    The students will practice identifying the appropriate basic statistical tests when given a scenario and learn how to run and interpret those statistical tests in R.
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