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    2020-TeachingModule-ModelingFallingColumnOfWater
    We discuss how to model a falling column of water empirically and analytically from first principles in physics laws.

    Keywords: modulecolumn of waterTorricelli's LawTorricelliTeaching Module

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    2020-TeachingModule-SpreadOfCommonColdSimulation
    This simulation is meant to introduce the idea of a differential equation model and investigate the impact of heightened hygiene and decreased interactions on the spread of an infectious disease....

    Keywords: simulationmoduleinfectious diseasediseasespreadTeaching Modulespread of disease

    246

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    1-132-DigoxinElimination-ModelingScenario
    We model the concentration of digoxin eliminated from the human body at a rate proportional to the concentration. This is a ``first-order reaction'' in the language of pharmacokinetics -- the study...

    Keywords: nullclinespharmacokineticsdigoxindrug eliminationtwo compartment

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    Quantifying Bacterial Growth in the Guts and Hemolymph of Fruit Flies: Mathematical Modeling and Data Interpolation/Extrapolation
    In this activity, students will analyze raw data obtained from an experiment that explores the effect of overexpressing the Ssk protein in order to strengthen the intestinal barrier and prevent...

    Keywords: graphingexponential growthlinear modelsqbccinterpolationConcepts in Statistics and Precalculus Understanding exponential rates and linear slopesExtrapolation

    2023

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    321

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    1-155-CruiseControl-ModelingScenario
    In this project we illustrate the design of a proportional-integral-derivative (PID) cruise control algorithm for an automobile. PID control is one of the most common techniques in control...

    Keywords: PID controllerfeedback controlControl theorycruise controlautomobileclosed-loop controlinput-ouputblock diagram

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    Healing the scars: Tropical rainforest carbon cycling. Does it matter which tree species you plant?
    This online module explores how differences in traits of tropical tree species translate into differential effects on the carbon cycle, integrating ecological information across scales and the...

    Keywords: climate changecarbon cyclingtropical biology4DEE Frameworkforest restorationtropical tree speciessoil carbon

    354

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    High technology to measure forest carbon stocks: How can advanced remote sensing improve biomass quantification in the Brazilian Amazon?
    A case study on the estimation of aboveground biomass using advanced remote sensors (LiDAR and hyperspectral) in the Brazilian Amazon. Students explore remote sensing (RS) data and compare RS-based...

    Keywords: climate changeremote sensinghyperspectraltropical forestsLiDAR data analysiscarbon stocks

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    Walkabout: An Easy to Use, Experiential Learning Activity for Applying Abstract Concepts to the Real-World
    Students can have difficulty recognizing examples of course concepts in the real-world. They particularly struggle with phenomena that are ambiguously defined, have mimics, or are hard to...

    Keywords: data gatheringgreen technologyobservations

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    Introduction to Primate Data Exploration and Linear Modeling with R
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology research students on data management and statistical...

    Keywords: R programming languageprimatespopulation ecology

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    Module M.8 Survival analysis
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

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    COVID-19 Spread NetLogo ABM
    This project aimed to utilize agent-based modeling in NetLogo to create a simulation of COVID-19 spread in a traditional college classroom. The model allows for an evaluation of different...

    Keywords: classroomNetLogoagent-based modelingdisease prevention

    382

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    Central Dogma, Dictionaries, and Functions: Using Programming Concepts to Simulate Biological Processes
    Technologies like next-generation sequencing, proteomics, and high-throughput phenotyping have transformed the way we do biology. There is a continued need for scientists with computational skills...

    Keywords: computationpythonJupyter notebookFunctionscentral dogmaDictionaries

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    Module M.4 Simple linear regression analysis
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

    703

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    382

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    ICABL: An Inclusive Community for the Assessment of Biochemistry and Molecular Biology (BMB) Learning (RCN-UBE Introduction)
    ICABL is an inclusive and collaborative community that supports the professional development of biochemistry and molecular biology scientist-educators committed to the enhancement of student...

    Keywords: RCN-UBE Introduction

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    The (STEM)2 Network - Sustainable, Transformative Engagement across a Multi-Institution and Multidisciplinary STEM Network (RCN-UBE Introduction)
    Enhance undergraduate STEM education by promoting new and strengthening existing collaborations among biology, chemistry, and math faculty at 2- and 4-year institutions; and support faculty in...

    Keywords: RCN-UBE Introduction

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    1-104A-T-InfectionRisk-ModelingScenario
    This project is designed to examine differences between the exponential and logistic growth models in biology and how to apply these models in solving epidemic questions and comparing to actual...

    Keywords: regressioninfectionCOVID19carrying capacitylogistic equationexponential model

    491

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    Fatty Acid Induction of Lipid Droplets in Cancer Cells
    There is a growing need for the development and communication of cell culture-based laboratory activities specifically designed for undergraduate students. This multi-week laboratory activity...

    Keywords: Course based undergraduate researchCell ImagingLive Cell Staining

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    3-100-Ripcord-Toys-ModelingScenario
    This modeling scenario examines the motion of a ripcord-powered toy with the goal of using real data to estimate parameters in a first-order model of the velocity of the toy. Students may conduct...

    Keywords: dataphysicsdynamicsdata collectionrollingslippingripcordtoy

    334

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    3-130-MatterOfSomeGravity-ModelingScenario
    This project introduces the concept of an inverse problem (or parameter estimation), in the context of the simple linearized pendulum ordinary differential equation.

    Keywords: gravityinverse problemacceleration

    236

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    BEIC - Creation of the Biology Educator/Researcher Cross-Segment Collective (RCN-UBE Introduction)
    The Biology Education Intersegmental Collaborative aids faculty learning communities consisting of 2- and 4-year partners to improve community college and transfer student outcomes. BEIC supports...

    Keywords: RCN-UBE Introduction

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