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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Java String substring usage, initials
    CPSC1100 Fall 2017, UTC. Big Java Chapter 4.

    Keywords: videosjavabioinformaticsgenomicsyoutubeJava String

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    UNR Bioinformatics Videos
    Two videos developed by Pedro Miura about bioinformatics at UNR

    Keywords: videosbioinformaticsgenomicsyoutube

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    Northern Processing
    Using photoshop and illustrator from tif file to make a figure

    Keywords: videosbioinformaticsgenomicsnorthern processingphotoshopillustrator

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    Aging and Circular RNAs
    A science FIT seminar presented to incoming freshmen at UNR

    Keywords: videosbioinformaticsRNAaginggenomicsyoutubecircular rna

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    Screen Casts for Foundations of Bioinformatics at UCSD
    Collection of videos developed by Barry Grant at UCSD for his course, BGGN-213

    Keywords: videosbioinformaticsgenomicsyoutubescreen cast

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    Using Jetstream for Bioinformatics
    A pre-class screencast for UCSD’s Foundations of Bioinformatics course (BGGN-213).

    Keywords: videosbioinformaticsgenomicsyoutubescreen castjetstream

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    How do we do Bioinformatics?
    A description of the computational setup for “Foundations of Bioinformatics” (BGGN-213) See: http://thegrantlab.org/bggn213/

    Keywords: bioinformaticsgenomicsyoutubescreen cast

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    What is Bioinformatics?
    This second screencast introduces bioinformatics, details major leaning goals & expectations of BGGN-213 and outlines the areas of bioinformatics covered in ...

    Keywords: videosbioinformaticsgenomicsyoutubescreen castintroductory bioinformatics

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    Foundations of Bioinformatics (BGGN-213)
    This first short screen-cast introduces “Foundations of Bioinformatics” (BGGN-213) course at UCSD and covers some pre-course logistics.

    Keywords: bioinformaticsgenomicsyoutubescreen cast

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    Video Tutorials for Computational Genomics
    YouTube videos by Laura Harris on a variety of genomics and bioinformatics topics.

    Keywords: videosbioinformaticsgenomicsfmnyoutube

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    ProteinPhysiochemistry
    How to determine physiochemical features of proteins using ExPasy Protpram, SOSUI server, and PSortB programs.

    Keywords: videosbioinformaticsproteinsgenomicsyoutubeprotein physiochemistryExPasy ProtpramSOSUI serverPSortB

    1135

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    LEAGSEA
    How to perform Leading Edge Analysis in Gene Set Enrichment Analysis by Broad Institute

    Keywords: videosbioinformaticsgenomicsyoutubeLEAGSEAgene set enrichmentLeading Edge Analysis

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    Using Phyre2
    How to use Phrye2 and 3DLigandSite to computationally predict protein and active site structure and binding partners (substrates/cofactors/coenzymes).

    Keywords: videosbioinformaticsproteinsgenomicsyoutubephyre23DLigandSite

    1194

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    NCBI Overview
    An overview of some of the databases within NCBI and how to get FASTA sequences.

    Keywords: videosbioinformaticsFASTAgenomicsNCBIyoutube

    1081

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    UniProt
    Brief description of UniProt and its databases and features

    Keywords: videosbioinformaticsgenomicsyoutubeuniprot

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    GSEAtheory
    Brief introduction to how gene set enrichment analysis works.

    Keywords: videosbioinformaticsgenomicsyoutubegsea

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    Simple Heat Maps with Morpheus
    Learn how to load an Excel file of raw data into Morpheus and change between relative and global scales.

    Keywords: Excelbioinformaticsgenomicsyoutubemorpheusheat maps

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    What is bioinformatics?
    Short description of what bioinformatics is, it's potential applications, and what it is not.

    Keywords: videosbioinformaticsgenomicsintroductionyoutube

    1106

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    235

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    How to create "funny symbols" (aka math / statistical notation) in Microsoft Word / Office
    YouTube video on using statistical notation in Microsoft Word.

    Keywords: videosonline learninggenomicsyoutubestatistics symbols

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    Fostering and sustaining interdisciplinary faculty communities around undergraduate teaching: Insights from the QUBES project
    Presentation part of a minisymposium at the SIAM Applied Mathematics Education (ED18) conference, "Communities of Practice for Math Modeling Education"

    Keywords: SIAMapplied mathematicsfaculty communities

    1178

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