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    Defining Life: Exploring Creativity, Scientific Discovery, and Biology Core Concepts in a Disciplinary First-Year Seminar
    This unit, Defining Life, engages students in thinking like scientists, applying creativity to science, and learning biology core concepts as they explore the defining characteristics of life. This...

    Keywords: Evolutionbiologycellprocess of science

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    Investigating the ecological value of migratory fishes on stream ecosystems in southern Appalachia
    Using the Ecological Society of America’s Four-Dimensional Ecology Education (4DEE) framework, students apply ecological concepts such as energy flow, nutrient cycling, migration, and climate...

    Keywords: Stream ecologynutrient cycling4DEE Frameworkfish migration

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    Exploring Microbial Diversity: An Interactive In-Class Assignment for Biology and Microbiology Courses
    This interactive assignment engages students in a hands-on exploration of microbial diversity and the importance of microbes in ecosystems. Designed for General Biology II and Introduction to...

    Keywords: Microbiology EducationMicrobial DiversitymicrobiologyEcological Society of Americaecology educationresearch-based classroom instruction4DEE Framework

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    Teaching Thermal Physiology of Reptiles and Amphibians to Undergraduate Students
    This module contains materials and activities for teaching undergraduate students about the thermal physiology of reptiles and amphibians. The module begins with an interactive lecture introducing...

    Keywords: animalecologyconservationclimate changeHerpetologyUndergraduatephysiologyTemperature ChangeAmphibans and ReptilestemperatureMetabolismsnakesdigestive systemreptileslizardcrticial thermal maximumthermoregulation

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    Fish, forests, and phosphorus: How do tropical fish, rainforest canopies, and volcanic groundwater inputs affect stream phosphorus cycling?
    Rainforest stream nutrient concentrations vary with groundwater source, and different stream fish species feed on aquatic and/or terrestrial prey. Explore how phosphorus cycling changes with stream...

    Keywords: nutrient cyclesBiogeochemistrykeystone speciesfood webFunctional Diversity

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    Using Aquatic Macroinvertebrates in Stream Bioassessment
    Bioassessment is an evaluation of the biological condition of a waterbody using biological surveys and other direct measurements of resident living organisms. Aquatic macroinvertebrates are...

    Keywords: toleranceMacroinvertebratesRiver Field Studies Networkbioindicatorbioassessmentstream health

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    Geography and Embodied Perceptions: a pathway to reanimating rivers through lived experiences.
    In this lesson students embark upon a journey through the many ways we come to know a watershed, with foci on its physical geography and our embodied perceptions. This enables students to formulate...

    Keywords: PhilosophygeographyRiver Field Studies Networkperceptionwatershednature journalexperiencesensationhumanityplacehomeembodied perceptionsense of placeplace attachmenttransdisciplinaryqualitative methodscalable

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    Microhabitats and macroinvertebrates: Logjam influences on stream morphology and macroinvertebrate traits
    Logjams are important hydrologic features that shape stream channel morphology and create habitat for organisms. In this lesson, students learn about and measure logjams in a wadeable stream and...

    Keywords: aquatic macroinvertebrateswoodriparian ecologyhabitatfunctional feeding groupRiver Field Studies Networklarge wood

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    Measuring streamflow using the float method
    Streamflow, the amount of water flowing in a creek, stream, or river at a certain point in time, is critical to people and the environment. Knowing the amount of flowing water is important for...

    Keywords: River Field Studies Networkstreamflowstreamflow measurements

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    An Inquiry-Based Project Added to Traditional Labs: Hands-On Fish Awareness Research in Freshwater Systems Conducted by First-Year Biology Students
    This project involves students in an inquiry-based project added to the introductory biology laboratory course for majors in fall 2019. Research has shown that student engagement in authentic...

    Keywords: Evolutionbehaviorichthyology

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    Regulation of Malate Dehydrogenase by Fumarate
    A "snippet" paper

    Keywords: JoCURE

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    My Fish Tank: An Active Learning Activity for Bacterial Nitrogen Metabolism
    This active learning activity introduces students to the second part of the nitrogen cycle, nitrification. In terrestrial and aquatic environments, bacteria from the Nitrosomonas and Nitrobacter...

    Keywords: nitrogen cyclenitrificationnitrifying bacteria

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    Fragile States: A Case Study Exploring Genetics, Molecular Biology, and Biochemistry Through the Lens of Fragile X Syndrome
    This case aims to strengthen students’ understanding of molecular biology concepts through study of Fragile X Syndrome (FXS). Students begin by learning the cause and phenotypes of FXS and...

    Keywords: gene regulationtranscriptiontranslationFragile X syndrometriplet repeat expansionsex linkagemetabolic pathway

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    Population Ecology of the Northern Spotted Owl
    The mathematical modeling of populations utilizing field-collected demographic data is an important component of lab curricula in a variety of undergraduate biology lab courses. During the global...

    Keywords: demographyCommunity Ecologypopulation ecologyconservation biologylife tables

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    Healing the scars: Implementing an online module about tropical rainforest carbon cycling in an undergraduate majors ecology course
    This resource provides a guide to classroom implementation of a Gala module focused on tropical carbon cycling. I adapted the module to include a discussion of the importance of carbon cycling in...

    Keywords: carbon cyclestreamstropical

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    Central Dogma, Dictionaries, and Functions: Using Programming Concepts to Simulate Biological Processes
    Technologies like next-generation sequencing, proteomics, and high-throughput phenotyping have transformed the way we do biology. There is a continued need for scientists with computational skills...

    Keywords: computationpythonJupyter notebookFunctionscentral dogmaDictionaries

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    Fatty Acid Induction of Lipid Droplets in Cancer Cells
    There is a growing need for the development and communication of cell culture-based laboratory activities specifically designed for undergraduate students. This multi-week laboratory activity...

    Keywords: Course based undergraduate researchCell ImagingLive Cell Staining

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    VISABLI - an RCN-UBE for Visualizations, Interactive Simulations, and Animations for Biology Learning & Instruction (RCN-UBE Introduction)
    Our network improves instructional multimedia design for biology education by fostering communication and collaboration among members of three communities: undergraduate biology instructors,...

    Keywords: RCN-UBE Introduction

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    2011-Nguyen-Shi-Modeling the absorption circulation and metabolism of tirapazamine
    This apparently is a student project and it develops the kinetic model, uses Matlab for numerical solution, analytic solution and numerical solution.

    Keywords: absorptionMichaelis-MentenMetabolismdrug metabolismcirculation

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    2010-Shianga-EtAl-Computational model of the human glucose-insulin regulatory system
    A computational model of insulin secretion and glucose metabolism for assisting the diagnosis of diabetes mellitus in clinical research is introduced. The

    Keywords: glucose tolerance testsum of squared residualsmultiple shooting methodcost function

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