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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Cell Biology by the Numbers
    Vignettes that reveal how numbers serve as a sixth sense to understanding our cells

    Keywords: datacell biologyNumbersratesconcentrationMeasurementestimation

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    Understanding Eukaryotic Genes modules: Glossary of terms
    This glossary defines the key terms that are used in the Understanding Eukaryotic Genes modules.

    Keywords: geneticsmolecular biologygenomicsGlossary

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    REMNet Tutorial, Excel Part 2: Understanding Your Microbiome “Data Summary” Document 4.25.19
    Video on understanding microbiome data from the Research Experiences in Microbiomes Network
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    Survey Findings - RIOS Outcome Survey Fall 2022
    Summary of survey findings to understand members of the RIOS Institute's experience with RIOS since the project’s inception.

    Keywords: evaluation

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    Regulation of Malate Dehydrogenase by Fumarate
    A "snippet" paper

    Keywords: JoCURE

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    Teaching biostatistics using the Rule of Four
    A guide to helping intro bio students develop a deeper understanding of key statistical concepts by translating among numeric, graphical, verbal, and symbolic representations.

    Keywords: statisticsbiostatisticsintroductory biologyQuantitative reasoningBIOME 2022

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    Understanding COVID-19 Biology to Design a Vaccine - Ethics supplement
    The adaptation to Understanding COVID-19 Biology to Design a Vaccine entails two ethics supplements. The first supplement addresses the use of off-label drugs in the pandemic (or other situation)....

    Keywords: bioethicsBLASTprotein structure modelingmolecular visualization and analysisethicsCOVID19PDB

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    QUBES: Building a community to promote undergraduate quantitative biology education
    QUBES is designed to improve communication among educators, assist faculty in understanding and implementing novel content and teaching strategies in their classrooms, and create an academic reward...

    Keywords: QUBES

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    Traditional Ecological Knowledge and Natural History
    In this module, students will explore Western Science and Traditional Ecological Knowledge and review a case study of how the TEK of the Inuit provided a way of knowing and understanding the...

    Keywords: Traditional ecological knowledgeUnderstanding ScienceBowhead Whale

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    Human Population Growth and Greenhouse Gas Emissions
    Humans alter the climate by emitting greenhouse gases, by changing planetary albedo, and by altering atmospheric chemistry. Between 1900 and 2000, humans' emissions of carbon into the atmosphere...

    Keywords: demographyhuman populationgreenhouse gas emissions

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    Integration of Bioinformatics into Life Science Curricula: Community Development, Dissemination, and Assessment of a NIBLSE Learning Resource
    Big data and computational tools have transformed the way we address biological questions. To prepare undergraduates for tomorrow’s challenges, life science curricula should integrate the...

    Keywords: bioinformaticsNIBLSELife Science

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    Following the Data - PowerPoint Addition to Module
    This PowerPoint presentation guides instructors and students through the key background information for the module.
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    Linear Models and Linear Mixed Effects in R: Tutorial 1
    The first of two tutorials that introduce you to linear and linear mixed models.

    Keywords: statisticsmathematicsRdata analysisconceptsstatsregressionmixed modelslinear modelsfixed effectsResources @ QUBES - Teaching & Reference

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    Introduction to Data Management and Metadata using NEON aquatic macroinvertebrate data
    This lesson focuses on understanding metadata, the data about the data, using aquatic macroinvertebrate abundance and species information from a variety of NEON sampling locations.

    Keywords: data managementSpreadsheetmetadata

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    Geography and Embodied Perceptions: a pathway to reanimating rivers through lived experiences.
    In this lesson students embark upon a journey through the many ways we come to know a watershed, with foci on its physical geography and our embodied perceptions. This enables students to formulate...

    Keywords: PhilosophygeographyRiver Field Studies Networkperceptionwatershednature journalexperiencesensationhumanityplacehomeembodied perceptionsense of placeplace attachmenttransdisciplinaryqualitative methodscalable

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    Understanding Global Climate Change: Present, Past, and Future
    Understanding global climate change through the lenses of the present, past, and future, combining modern technology and indigenous knowledge and ways of knowing.

    Keywords: climate changeglobal changeabiotic environmentindigenous knowledge

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    COVID-19: Molecular Basis of Infection
    This case was written in Spring 2020 during the COVID-19 pandemic. It focuses on understanding the structure and interaction of the SARS-Cov-2 viral spike protein that facilitates infection in...

    Keywords: infectionvaccinemolecular visualization and analysisCOVID19PDBSARS-CoVMolecular Case Study

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    Happy Blue Baby
    This case, about a specific mutant of hemoglobin, focuses on visualizing and understanding the molecular basis of why an infant turned blue soon after birth and how the cyanosis resolved on its own...

    Keywords: mutationHemoglobinmolecular visualization and analysisPDBMolecular Case Study

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    Following the Data
    The video and exercise provides insight into how researchers are using digital data resources to investigate biodiversity in prairie fen wetlands.

    Keywords: data in the classroomprocess of sciencebiodiversity informatics

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    2013-Greer-EtAl-Collaborative Understanding of Cyanobacteria in Lake Ecosystems
    We describe here a collaboration in which the mathematicians help collect data, the ecologists synthesize more data from model output than they can produce empirically, and the collaboration...

    Keywords: collaborationlakeecosystemcyanobacteriafield workcolonyGloeo

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