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    1-140-LeakyBucket-ModelingScenario
    We seek to model the height of water in a cylindrical tank (bucket) in which water flows out the bottom of the tank through a small bore hole while we are pouring water into the tank at the top...

    Keywords: flowTorricelli's Lawleaky bucket

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    1-142-WaterBottles-ModelingScenario
    This project involves the application of Newton's law of cooling to the study of insulated water bottles. Students have the option to conduct experiments with their own bottles outside of class or...

    Keywords: data collectionexperimenthalf-lifeNewton's Law of Coolingwater bottle

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    5-011-ModelingIbuprofren-ModelingScenario
    We consider modeling of data from a clinical experiment administered as oral doses of 400 mg ibuprofen, an analgesic pain reliever. Concentrations of ibuprofen in the serum/plasma of the subjects...

    Keywords: dataAICAkaike Information Criterionabsorptionsum of square errorscompartment modelibuprofendelay

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    6-028-SaltCompartments-ModelingScenario
    Model a phenomena in which salt mixtures from two tanks are mixed with changing volumes of water.

    Keywords: concentrationcomparmentsalttankmixing

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    Parabolas Everywhere?
    In this lesson students will use mathematical models to describe real-world objects and to gain better understanding of quadratic functions.
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    Analysis of Amylase Activity
    This lab is an exploration of enzyme function and the effects of environmental conditions on the activity of the enzyme amylase. The lab utilizes analytical and graphing skills to assess enzyme...

    Keywords: data analysisintroductory biologyconcentrationgraphinglinear equationsBiochemistryscientific methodstandard curveenzyme functionMicrosoft ExcelInterpreting GraphsenzymesqbccCreate graphsInterpret graphsSolving Equations and Inequalitiesinterpret tablesAmylaseAlpha-amylaseEnzyme activityMaltoseDNS assayAbsorbancelab reportspectrophotometryregression linemanipulating equationsline of best fitgraphing by hand

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    When did I lose my legs? A limbless lizard tale
    Using oVERT project models students examine examples of extant traditional lizards, snakes and limbless lizards and create phylogenies based on trait and genetic data.

    Keywords: phylogeneticsevolutionary biologyHerpetologynatural history collections3D models#NGSSdigitized natural history collectionsoVertConvergent Evolution

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    Conservation and ethics of using synthetic genetics
    This contains teaching material - powerpoints and handouts that can be adapted for lectures and/or discussion groups.
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    Adapted Value of Mistakes
    This module is adapted from BIOMAAP materials on the value of mistakes and application of growth mindset in a microbiology lab.

    Keywords: growth mindsetmath attitudesResources @ BIOMAAPmistakesvalue of mistakes

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    Discrete Math Modeling with Biological Applications (Course Materials)
    These are the materials for Math 214 offered at Rhodes College.

    Keywords: labsagent-based modelingDiscrete Difference Equationsmatrix modelscoursebiomath coursedemonstrationin-class activitylab protocolproblem set

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    Climate Change, Phenology, and Community Interactions: Helping students explore the complexity of changing ecosystems
    Students explore findings from long-term studies of migrating and hibernating animals at high elevation. Students then use this understanding to explore the phenology of species and possible...

    Keywords: species interactionsclimate changefmnphenologyDIGenvironmental variationtrophic mismatch

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    ModelSim Population Biology Unit
    This resource provides rich student modeling activities and materials, teacher resources, and much more, in the realm of agent based models applied to population biology.

    Keywords: modelingsimulationmoduleEvolutioncase studycurriculumagent-based modelpopulation modeldemonstrationin-class activityPresentation

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    Data from: Advancing population ecology with integral projection models: a practical guide
    Review important resources for building IPMs and provide a comprehensive guide, with extensive R code, for their construction.

    Keywords: IPMintegral projection modelsdemographyelasticitylife historymatrix projection modelpopulation growth ratepopulation projection modelsensitivitystage structurevital ratesResources @ DryadResources @ QUBES - Data

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    Advancing population ecology with integral projection models: a practical guide
    Integral projection models (IPMs) use information on how an individual's state influences its vital rates – survival, growth and reproduction – to make population projections using regression...

    Keywords: IPMintegral projection modelspopulation growthreviewsdemographyelasticitylife historymatrix projection modelpopulation growth ratesensitivitystage structurevital ratesregressionResources @ QUBES - Teaching & Referencecovariatesanalytics

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    BioNumbers-the database of key numbers in molecular and cell biology
    BioNumbers is a database of key numbers in molecular and cell biology—the quantitative properties of biological systems of interest to computational, systems and molecular cell biologists

    Keywords: dataResources @ BioNumbersNumbersestimationdatabaseResources @ QUBES - Teaching & Reference

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    Geology
    In this video, we discuss how studying the rocks and minerals around us can tell us about the history of the planet. We also discuss what makes a scientific law and how those laws are applied in...

    Keywords: videosgeologyScience Forwardproxiesscientific law

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    Seed Dispersal, Mutualisms, and Communities
    In this activity, students use data from published studies to understand patterns of seed dispersal and apply these ideas to understanding the evolution of mutualisms, and how mutualistic...

    Keywords: mutualismsecologyResources @ HHMI - BioInteractivecommunityplantsdiversityScientific Processlarge lecture

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    The Insect Predation Game: Evolving Prey Defenses and Predator Responses
    Laboratory experiment included in Teaching Issues and Experiments in Ecology (TIEE) Volume 4

    Keywords: simulationpredator-preypredation ecology

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    Characterizing the Quantitative Biology Curricula from Institutions Across the United States
    Undergraduate research poster presented at the Undergraduate Research Symposium at the University of Pittsburgh in 2015.

    Keywords: Mathematical Biologycurriculumundergraduate researchinterdisciplinaryPresentation

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    Using Bioinformatics and Molecular Visualization to Develop Student Hypotheses in a Malate Dehydrogenase Oriented CURE
    Developing student creativity and ability to develop a testable hypothesis represents a significant challenge in most laboratory courses. This lesson demonstrates how students use facets of...

    Keywords: bioinformaticsNoncovalent InteractionsEnzyme CatalysisProtein Structure/function

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