You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Introduction to Primate Data Exploration and Linear Modeling with R
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology research students on data management and statistical...

    Keywords: R programming languageprimatespopulation ecology

    2921

    views

    255

    downloads

    0

    comments

    0

    adaptations

    Examining human impacts on tusk evolution in elephants using authentic research data
    In this activity students explore and analyze real, authentic research data paired with HHMI’s “Selection for Tuskless Elephants” video in a hands-on investigation of human impacts on elephant...
    2528

    views

    5277

    downloads

    0

    comments

    1

    adaptations

    Exploring Miracle Fruit: An Undergraduate Laboratory Exercise on Experimental Design
    In recent years, undergraduate biology and biochemistry curricula have seen an increase in the use of course-based undergraduate research experiences (CUREs). CUREs maximize potential student gains...

    Keywords: sensory systemspHProtein shapeTaste

    2425

    views

    448

    downloads

    0

    comments

    0

    adaptations

    Biostatistics using R: A Laboratory Manual
    Biostatistics Using R: A Laboratory Manual was created with the goals of providing biological content to lab sessions by using authentic research data and introducing R programming language to...

    Keywords: biostatisticsR programming language

    5152

    views

    626

    downloads

    2

    comments

    0

    adaptations

    Chapter 9: One-way analysis of variance
    Biostatistics Using R: A Laboratory Manual was created with the goals of providing biological content to lab sessions by using authentic research data and introducing R programming language....

    Keywords: biostatisticsR programming language

    965

    views

    553

    downloads

    0

    comments

    0

    adaptations

    Chapter 2: Data sampling, accuracy, and precision
    Biostatistics Using R: A Laboratory Manual was created with the goals of providing biological content to lab sessions by using authentic research data and introducing R programming language....

    Keywords: biostatisticsR programming language

    1106

    views

    2271

    downloads

    0

    comments

    0

    adaptations

    Cell Collective: Computational Modeling and Simulation Designed with the Classroom in Mind
    This working group collaborated on content and pedagogy surrounding the use of Cell Collective to integrate computational modeling and simulation into undergraduate biology curriculum.
    924

    views

    793

    downloads

    0

    comments

    0

    adaptations

    CUNEL - Connectomes for Undergraduate Neuroscience Education and Learning (RCN-UBE Introduction)
    The Connectomes for Undergraduate Neuroscience Education and Learning (CUNEL) project seeks to bring cutting-edge neuroscience methods into undergraduate classrooms and laboratories in order to...

    Keywords: RCN-UBE Introduction

    590

    views

    91

    downloads

    0

    comments

    0

    adaptations

    Students Authoring Molecular Case Studies
    Poster on using case studies to help students develop their skills in reading primary literature and identifying authentic scientific problems by authoring their own case studies. Presented at the...

    Keywords: case studiesProtein StructureProtein Data BankMolecular Case Study2021 BIOME

    1212

    views

    362

    downloads

    0

    comments

    0

    adaptations

    Using Bioinformatics and Molecular Visualization to Develop Student Hypotheses in a Malate Dehydrogenase Oriented CURE
    Developing student creativity and ability to develop a testable hypothesis represents a significant challenge in most laboratory courses. This lesson demonstrates how students use facets of...

    Keywords: bioinformaticsNoncovalent InteractionsEnzyme CatalysisProtein Structure/function

    4035

    views

    615

    downloads

    0

    comments

    0

    adaptations

    Strategies for developing a science communicator through authentic science writing assignments
    To prepare biology undergraduates to be able to read and evaluate the primary literature, it is beneficial to teach students how to write documents in the style of professional science style...

    Keywords: communicationPeer reviewscience writing

    894

    views

    178

    downloads

    0

    comments

    0

    adaptations

    Inquiry-based hypothesis testing using phylogenetic trees in MEGA
    A key learning objective in biology is applying bioinformatics tools to test a real-life question. These inquiry-based modules have students assemble and align data, and construct simple...

    Keywords: phylogeneticsbioinformaticsFASTANCBIBLASTmultiple sequence alignmentsequence similarityCourseSourceZika virusMEGAalcohol metabolism

    1083

    views

    660

    downloads

    0

    comments

    0

    adaptations

    Investigating the effects of urbanization on bird biodiversity: Testing three biodiversity hypotheses using citizen science data
    Students generate predictions and test three hypotheses about how biodiversity is affected by urbanization over time using citizen science generated bird count data and land use data from 13...

    Keywords: hypothesis testingBiodiversityurbanizationguided inquiryland useproductivity hypothesisecosystem stress hypothesisintermediate disturbance hypothesis

    2688

    views

    3142

    downloads

    0

    comments

    0

    adaptations

    Sequence Similarity in Developmental Biology - A Bioinformatics Exercise Using Myostatin
    This exercise leads upper level biology majors in an inquiry-based excursion to determine how similar the signaling molecule, myostatin, is between humans and mice, using a basic set of...
    1322

    views

    2463

    downloads

    0

    comments

    0

    adaptations

    Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses
    This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.

    Keywords: phylogeneticsbioinformaticssequencingFASTANCBINIBLSEalgorithmsincubatorsBLASTmultiple sequence alignmentsequence similarityBLOSUM scoring matrixneighbor-joining distance matrixCourseSourcephylogramZika virus

    4691

    views

    823

    downloads

    1

    comments

    8

    adaptations

    How the Scientific Method Works
    An episode dedicated to learning about how we explore our world using the scientific method.

    Keywords: scientific methodstuff you should knowResources @ QUBES - Teaching & Referencescienceepisodeexplore

    1035

    views

    197

    downloads

    0

    comments

    0

    adaptations

    Teaching Biodiversity with Museum Specimens in an Inquiry-Based Lab
    In response to the growth of biology datasets and broad efforts to digitize data, an increasingly important skill for science students is the management and analysis of large datasets. We designed...

    Keywords: data analysisnatural historyphylogenyBiodiversitymammalsAllen's RuleBergmann's Ruleecogeographymuseum research

    2666

    views

    684

    downloads

    0

    comments

    0

    adaptations

    Design Your Own Flow Cytometry Experiment: A Four-Week Inquiry Laboratory
    Due to its importance to the field, flow cytometry should be one of the hallmark methods a student learns in the lab portion of an undergraduate immunology course. Flow cytometry is a classic lab...

    Keywords: Immunologyexperimental designFlow cytometryMice

    4088

    views

    648

    downloads

    0

    comments

    0

    adaptations

    You and Your Oral Microflora: Introducing non-biology majors to their “forgotten organ”
    With limited time available for laboratory activities, introductory science courses for non-science majors typically use the laboratory period to reinforce material that was previously presented...

    Keywords: bacteriamicrobiomeBLASTmicrobesDNA replicationPolymerase chain reaction (PCR)

    2267

    views

    281

    downloads

    0

    comments

    0

    adaptations

    Understanding Protein Domains: A Modular Approach
    An understanding of protein structure, function, and interaction is central to biochemistry. One angle into this topic is to engage students in considering protein domains as modules that develop...

    Keywords: Protein Structure

    1486

    views

    329

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search