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    Robot vs. Disease: Using CellProfiler to model biomedical research in your classroom
    Resource from the 2015 BioQUEST Summer Workshop

    Keywords: image analysisCellProfilerfluorescence microscopymicroscopycellular analysis

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    Data-Driven Decision-Making: Antarctic Fisheries
    This is an entire module for a general education data science and ecology course. The module was originally designed as the fourth and final section of the course; the full course is openly...

    Keywords: population growthRStudiodata visualizationexponential growthlogistic growthR Markdownspatial dataocean sustainability4DEE FrameworkTraditional ecological knowledgecarrying capacityEcosystem Servicesmaximum sustainable yield

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    2010-Singh-Mishra-athematical modeling approach to study growth rate of grassroots technological innovations
    In this paper we have proposed a simple mathematical model by using ordinary differential equation to know the spread rate of technological innovations in rural India.

    Keywords: logisticexponentialsigmoidtechnological innovationsasymptoticspread of innovation

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    1999-Meyer-Ausubel-Carrying Capacity-A Model with Logistically Varying Limits
    This paper extends the logistic equation to simple growth model with a logistically increasing carrying capacity. This is applied to human population situations in several countries with fits to data.

    Keywords: population dynamicsparameter estimationlimited growthgrowthlogisitic

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    Value of Mistakes. Making Mistakes Using R
    This module allows students to frame mistakes and frustrations during their first introduction to R in terms of improved learning and growth mindset.

    Keywords: growth mindsetmath attitudesResources @ BIOMAAPmistakesvalue of mistakes

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    Value of Mistakes
    This module familiarizes students with brain research describing our physiological response to mistakes, and how making mistakes is a useful part of learning.

    Keywords: growth mindsetmath attitudesResources @ BIOMAAPmistakesvalue of mistakes

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    1-038-Ebola-ModelingScenario
    Students will use data published by the World Health Organization to model the 2014 outbreak of the Ebola virus in West Africa. We begin with a simple exponential growth model and move through the...

    Keywords: population dynamicsdata analysisexponential growthEbolalogisticepidemic

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    Growth Mindset Prompt
    Before giving an introduction to growth mindset, these prompts can be given to students so they can brainstorm activities they associate with long hours of practice (growth mindset) vs. natural...

    Keywords: growth mindsetmetacognitionmath attitudesResources @ BIOMAAP

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    2011-Teleken-EtAl-Mathematical modeling of microbial growth in milk
    A mathematical model to predict microbial growth in milk was developed and analyzed. The model consists of a system of two differential equations of first order. The equations are based on physical...

    Keywords: bacteriadairymilkfood safetymicrobilogy

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    Comparing the Effect of Manure Compost vs. Fertilizer on the Growth of Raphanus sativus
    Manure compost is an organic fertilizer made up of manure or natural nitrogen contents, and typically only supplies crops with nitrogen. Synthetic fertilizer is a man-made compound mixture made...

    Keywords: agricultureplants

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    2000-Armson-Cockroft-Stone-Modelling a barnacle goose population
    This paper explores a number of models for the growth of a barnacle goose population. These geese spend their summers breeding in Spitsbergen and then winter in Caerlaverock on the Solway Firth....

    Keywords: population dynamicsexponentiallogistic equationBarnacle Geese

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    1-102C-CancerGrowth-ModelingScenario
    This module guides students in the use of differential equation models to predict cancer growth and study treatment outcomes. Several classical models for cancer growth are presented including...

    Keywords: optimizationcancerlogisticexponentialpredictiontumorgrowthdata fittingpower lawBertanffyGompertz

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    Investigating Cell Signaling with Gene Expression Datasets
    Modern molecular biology is a data- and computationally-intensive field with few instructional resources for introducing undergraduate students to the requisite skills and techniques for analyzing...

    Keywords: genomicstranscriptionsignaling

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    An active-learning lesson that targets student understanding of population growth in ecology
    Effective teaching and learning of population ecology requires integration of quantitative literacy skills. To facilitate student learning in population ecology and provide students with the...

    Keywords: population growthexponential growthlogistic growthpopulation ecologygrowth rateDensityAbundancecarrying capacitylinear growth

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    The Science Behind Parthenogenesis: Interesting things happen when meiosis goes “wrong”
    Parthenogenetic reproduction is a fascinating, complex topic.  This article accompanies “Why Meiosis Matters: The case of the fatherless snake.” It summarizes the basic information...

    Keywords: meiosismitosissex determinationAsexual reproductionParthenogenesis

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    Teaching Cancer Biology Through a Lens of Social Justice
    The biology classroom is not separate from the greater context of society; social issues can and should be presented in connection with the content. Here we present an example of antiracist...

    Keywords: assessmentcancersocial justicePOGILAlignmentPublic ExamPublic

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    Splicing it Together: Using Primary Data to Explore RNA Splicing and Gene Expression in Large-Lecture Introductory Biology
    At the heart of scientific ways of knowing is the systematic collection and analysis of data, which is then used to propose an explanation of how the world works. In this two-day module, students...

    Keywords: gene regulationtranscriptiongene expressioncentral dogmarepressoralternative splicingmRNA processingActivatorTranscription factors

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    RAT ATTACK! Population growth
    This module contains exercises focused on the use and interpretation of density independent and density dependent population growth models. Students build logistic and exponential growth models in...

    Keywords: modelingecologyExcelintroductory biologygraphingQuantitative reasoningdata visualizationinterdisciplinaryexponential growthlogistic growthdata managementInterpreting Graphspopulation modelingNIQBC2. Data and GraphsC4. mathematical modelsnonlinear models

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    From Cre/LoxP to Fate Maps: Inclusive and Equitable Approaches for Engaging Developmental Biology Students in Experimental Design
    Engaging first generation underrepresented minority students in the process of inquiry in developmental biology is important to increase diversity in future graduate STEM education. One important...

    Keywords: experimental designC. elegansCre/LoxPFate mapheart developmentheart regenerationmousereporter constructzebrafish

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    SCORE-UBE Final Evaluation Report
    Final evaluation report for the NSF funded RCN-SCORE Network which aimed to support members tackle shared issues in sustaining OER and OEP. The growth of the network continued to grow through...

    Keywords: STEM Evaluation

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