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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    3D FractaL-Tree
    3D FractaL-Tree allows scientists to collect data from actual specimens in the field or laboratory, insert these measurements into a spatially explicit L-system package, and then visually compare...

    Keywords: fractalsL-systems

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    EvolSeq
    An Excel worksheet that simulates the molecular evolution of DNA sequences.

    Keywords: molecular evolutionDNA

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    Luria-Delbruck
    These two workbooks model the evolution of phage resistance in a bacterial population under two alternative hypotheses.

    Keywords: phageLuria-Delbruckresistance

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    Michaelis-Menten Enzyme Kinetics
    In this simulation, equations used in enzyme kinetics (Michaelis-Menten, Eadie-Hofstee, Dixon, and Lineweaver-Burk) are modeled under various conditions.

    Keywords: Michaelis-Mentenenzymesenzyme kinetics

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    SIR BuildIt
    An introduction to epidemiological models using interactive Excel worksheets

    Keywords: modelinginfectious diseaseInfectious Disease ModelingSIR modelsSIR

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    ABO Blood Group Frequencies
    An Excel workbook in which students can calculate blood type frequencies through different approaches (Hardy-Weinberg, quadratic formula, and the EM algorithm). The workbook shows the formulas...

    Keywords: Hardy-Weinbergblood type frequencies

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    Digital Intro: Revitalizing the “Introduction to Psychology” course through Project-based Learning
    Welcome to Digital Intro where we are transforming introductory courses into active, project-based experiences. Our projects expose students to a wide range of digital skills as they learn...

    Keywords: psychologyDigital IntroIntroduction to PsychologyIntroductory PsychologyGeneral Psychology

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    Learning Communities as a Driver for Humanizing STEM: Cultivating Authentic Conversations about Anti-Racism in Introductory Biology Pedagogy using Duoethnography
    In this study we present a retrospective debrief of a learning community of college biology professors who were exploring how to define and implement racial equity-focused practices and content in...

    Keywords: Equitysocial justicediversity

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    Using genomic data and machine learning to predict antibiotic resistance: a tutorial paper
    Antibiotic resistance is a global public health concern. Bacteria have evolved resistance to most antibiotics, which means that for any given bacterial infection, the bacteria may be resistant to...

    Keywords: Tutorialmachine learningantibiotic-resistanceArtificial Intelligence

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    Defining Life: Exploring Creativity, Scientific Discovery, and Biology Core Concepts in a Disciplinary First-Year Seminar
    This unit, Defining Life, engages students in thinking like scientists, applying creativity to science, and learning biology core concepts as they explore the defining characteristics of life. This...

    Keywords: Evolutionbiologycellprocess of science

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    Cell Cycle and Mitosis
    This module introduces activities that allow students to walk through the cell cycle and mitotic cell division processes. As part of the activities, students learn about and apply knowledge of...

    Keywords: introductory biologyQuantitative reasoningInterdisciplinary STEMquantitative biologyinterdisciplinaryquantitative skillscell functioncell cyclemitosisCell DivisionMitotic Indexcalculating meanstumorNIQBC2. Data and GraphsC4. mathematical modelsC3. Statistical Analysisstandard errormitotic phaseinterphase

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    Integrating Artificial Intelligence with the Project Leadership App
    Project Leadership is a web-based application which empowers the STEM participants to take up leadership roles to develop diverse leadership skills. Implementing Project Leadership (PL) provides...

    Keywords: Artificial Intelligenceleadershipteam workproject leadership

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    Introduction to the Fculty Resource Guide: Integrating Social Justice, Diversity, Equity and Inclusion Issues in STEMM courses
    We live in challenging times. Higher education faces many challenges including changes in enrollment pattern, fiscal constraints and lack of public acceptance of the value of the degree relative to...

    Keywords: social justiceDEI statementsTeaching Controversial Issues

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    Leveraging Panel Discussions to Promote Positive Representation, Develop Science Identity, and Shift Stereotypes
    The overrepresentation of cis straight white male scientists in examples used in Biology curriculum makes it difficult for students with other axes of diversity (race/ethnicity, gender, sexuality,...

    Keywords: professional developmentEquitydiversityscience identitysense of belongingCentering Student VoicesCareer Paneland InclusionPositive Representation of Diverse ScientistsFostering Community Between Students

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    BIOME 2024 Workshop: “But we don’t teach ecology!”
    OCELOTS modules are open-access case studies in tropical ecology that promote active learning, quantitative skills, and systems thinking. This workshop is the prelude to a Fall FMN for adapting...

    Keywords: International researchtropical biologyBIOME 2024

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    Let me in: Interpreting graphs of parasite infection in red blood cells
    The goal of this activity is to familiarize students with reading graphs, to think about how cells are different from one another and how parasites can take advantage of cell surface markers to...

    Keywords: graph interpretationfmnCellsStem cellsmalariaBioGraphIrepresentation in STEMcell sortinginfection efficiencycell surface proteinscell recongitionred blood cells

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    A Structured Inquiry-Based Module for the Undergraduate Cell Biology Laboratory That Teaches Fundamental Concepts of Cell Differentiation
    Pedagogical research in science education has shown that students effectively learn science by doing science. As a result, there is increased interest in bringing research-like experiences into the...

    Keywords: fluorescence microscopygene expressionpolymerase chain reactionCell Structurecell culturewestern blottingdifferentiationreverse transcription

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    Exploring Microbial Diversity: An Interactive In-Class Assignment for Biology and Microbiology Courses
    This interactive assignment engages students in a hands-on exploration of microbial diversity and the importance of microbes in ecosystems. Designed for General Biology II and Introduction to...

    Keywords: Microbiology EducationMicrobial DiversitymicrobiologyEcological Society of Americaecology educationresearch-based classroom instruction4DEE Framework

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    BEDE Network Data Science Skills Curriculum Map
    The Biological and Environmental Data Education (BEDE) Network has produced this data science skills curriculum map as a flexible tool to help instructors highlight data science skills that they...

    Keywords: quantitative skillsscientific literacyCurriculum developmentdata science skills trainingdata literacy skills

    451

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    The Great Petunia Carnage of 2017: A Clicker Case Study Using Petunias to Describe the Effect of Genetic Modification on the Biochemistry of Flower Color and Phenotype in Plants
    In this single class period case study, students examine the difference between genotype and phenotype by studying the mechanisms by which commercially available petunias have been bred to have...

    Keywords: case studyGenetic ModificationsBiochemistry of Flower ColorGMO regulationsGenotype-Phenotype Connections

    1997

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