You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    1-082-MirroMirror-ModelingScenario
    This project models the ``Foucault Knife Edge Test,'' an optical test commonly used by amateur astronomers who make their own mirrors for reflecting telescopes. The goal of the test is to estimate...

    Keywords: astronomymirror climate change mitigation ocean deacidificationopticstelescopelensFoucaultinterpolation

    345

    views

    519

    downloads

    0

    comments

    0

    adaptations

    1-092-DashItAll-ModelingSenario
    This project uses very basic physics, Newton's Second Law of Motion, to model the motion of a sprinter running down a track. We derive the classic Hill-Keller model for a sprinter exerting...

    Keywords: datarunningsprintHill-Kellerworld recordOlympics

    364

    views

    206

    downloads

    1

    comments

    0

    adaptations

    6-026-IsleRoyaleModeling-ModelingScenario
    The primary aim of this project is to draw a connection between differential equations and vector calculus, using population ecology modeling as a vehicle.

    Keywords: ecologyoptimizationpredator-preypopulationvector calculusLagrange multipliersleast squaresIslel Royale

    240

    views

    440

    downloads

    0

    comments

    0

    adaptations

    4-023-MysteryCircuit-ModelingScenario
    Students to build a system of differential equations which model a circuit. We give each student a unique input voltage frequency parameter and ask for system response (gain) to that input as a...

    Keywords: filterscircuitRLC circuitKirchhoffvoltagegaindriver

    832

    views

    690

    downloads

    0

    comments

    0

    adaptations

    Diving into Deep Sea Data
    A module that combines NOAA's Okeanos Explorer and the iDigBio Portal to explore the deep sea!

    Keywords: Querying databasesremote sensingnatural history collectionsfishesscientific name5ESpeciesichthyologydeep sea

    1331

    views

    790

    downloads

    0

    comments

    0

    adaptations

    Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach
    This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein...

    Keywords: phylogeneticsbioinformaticssequencingFASTANCBIplant biologyNIBLSEalgorithmsincubatorsPlant and Fungal EvolutionBLASTmultiple sequence alignmentsequence similarityBLOSUM scoring matrixneighbor-joining distance matrixCourseSourcephylogram

    2259

    views

    1579

    downloads

    0

    comments

    0

    adaptations

    Using computational molecular modeling software to demonstrate how DNA mutations cause phenotypes
    This lesson is a five-week series of laboratory activities designed to help students transition from applying lower order thinking skills to the central dogma to applying higher-order thinking skills.

    Keywords: bioinformaticsNIBLSEProtein StructureDNAmolecular modelinggenotypephenotypeCourseSourcecomputational modelingcentral dogmaplant leaf structure

    1423

    views

    310

    downloads

    0

    comments

    0

    adaptations

    Teaching RNAseq at Undergraduate Institutions: A tutorial and R package from the Genome Consortium for Active Teaching
    This lesson plan was created to teach RNAseq analysis as a part of GCAT-SEEK network. It is provided here, both in finished form and with the modifiable source code, to allow flexible adaptation to...

    Keywords: statisticsR programming languagebioinformaticsNIBLSERNAseqgene expressionCourseSourcecomputer programming

    1964

    views

    524

    downloads

    0

    comments

    0

    adaptations

    Visualizing Global CO2 Emissions
    Using CO2 emissions data, students will learn how to visualize data with Tableau Public. The teaching materials are suitable for upper-level undergraduate courses on data analysis and research...

    Keywords: data visualizationResource Typeclimate change dataTableau

    3605

    views

    2864

    downloads

    0

    comments

    0

    adaptations

    A CURE in traits and species distributions: Reproductive modes, range sizes, and natural history collections
    This course-based undergraduate research experience (CURE) focuses on developing hypotheses about how traits influence the range sizes of species. Topics with substantive content include symbioses,...

    Keywords: Evolutionbiostatisticsecologynatural history collectionsSymbiosisspecies distributionsherbariumplant functional traitsLichenReproductive biologyAppalachian mountains

    2012

    views

    792

    downloads

    0

    comments

    0

    adaptations

    2017-Andrew_Lewis-Introduction_to_Differential_Equations_for_Smart_Kids
    The author addresses the question, "If I do not teach all of the usual techniques and tricks for solving differential equations, what do I replace it with?" in a number of wonderful ways.

    Keywords: differential equationsmodelingtextbook

    211

    views

    53

    downloads

    0

    comments

    0

    adaptations

    Promoting Climate Change Literacy for Non-majors: Implementation of an atmospheric carbon dioxide modeling activity as an inquiry-based classroom activity
    Students who are directly involved in scientific activities develop a deeper understanding and appreciation of both scientific knowledge and the scientific process. This understanding is critically...

    Keywords: modelingExcelquantitativeclimate changeEnvironmental Biologyatmospheric carbon dioxide

    1523

    views

    303

    downloads

    0

    comments

    0

    adaptations

    Developing Data Literacy Skills and Connecting the Student Experience in the Classroom to the Community Through Biodiversity Projects
    Undergraduate education and long-term science literacy are enhanced by integrating data projects with public datasets and creating analysis summaries. Underutilized public datasets are often...

    Keywords: species richnessBiodiversitydisturbanceHabitat rangePopulation abundance

    2816

    views

    551

    downloads

    0

    comments

    0

    adaptations

    A CURE-based approach to teaching genomics using mitochondrial genomes
    There is an abundance (currently over 1016 DNA bases) of publicly available genetic sequence data and a dearth of trained genomicists to process and interpret it, necessitating more trained...

    Keywords: proteinsMitochondrial GenomesNuclear GenomesrRNAtRNA

    1951

    views

    280

    downloads

    0

    comments

    0

    adaptations

    Thinking deeply about quantitative analysis: Building a Biologist's Toolkit
    Vision and Change in Undergraduate Biology Education encouraged faculty to focus on core concepts and competencies in undergraduate curriculum. We created a sophomore-level course, Biologists'...

    Keywords: Vision and ChangeRRStudioquantitative literacystatistical analysisScientific communication

    920

    views

    200

    downloads

    0

    comments

    0

    adaptations

    Discovering Prokaryotic Gene Regulation by Building and Investigating a Computational Model of the lac Operon
    The ability to construct and reason through a biological system is an important skill to develop in science education. This level of understanding forces students to recognize the interrelatedness...

    Keywords: prokaryotesgene regulationLac Operoninducible operon

    2273

    views

    276

    downloads

    1

    comments

    0

    adaptations

    Before You Start Publishing on QUBES
    This handy guide follows the Instructions for Authors to keep together all the text that can then be copied during the publication process. Notes and comments in this document are italicized so...

    Keywords: QUBESOERpublish on QUBESpublish

    482

    views

    143

    downloads

    0

    comments

    0

    adaptations

    BCEENET- Broadening undergraduate participation in ecology and evolution research through CUREs using digitized natural history collections data (RCN-UBE Introduction)
    Biological Collections in Ecology and Evolution Network (BCEENET) brings together natural history collections (NHC) professionals, undergraduate educators, data experts, and researchers to support...

    Keywords: Evolutionecologybiologyundergraduate researchdata managementnatural history collectionscourse-based research experiences (CUREs)digitized natural history collectionsBCEENETcourse-based undergraduate research experiences (CUREs)RCN-UBE Introduction

    1118

    views

    148

    downloads

    0

    comments

    0

    adaptations

    2017-Brandi-Garcia-Motivating engineering students to math classes - Practical experience teaching ODEs
    In this paper we propose an approach to teaching-learning process of mathematical concepts to engineering students with a motivational factor: a practical problem to be modeled in which students...

    Keywords: computational toolsteachingengineering studentspractical problem

    143

    views

    60

    downloads

    0

    comments

    0

    adaptations

    2007-I-Liang_Chern-Mathematical Modeling and Differential Equations
    In this course, I will mainly focus on, but not limited to, two important classes of mathematical models by ordinary differential equations: • population dynamics in biology • dynamics in...

    Keywords: population dynamicsecologydynamicsclassical mechanicschemical reaction

    175

    views

    72

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search