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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Lake Mixing Module (Project EDDIE)
    Students explore spatial and temporal patterns of lake mixing using high-frequency temperature data from lakes around the world.

    Keywords: stratificationProject EDDIE

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    Soil Respiration Module (Project EDDIE)
    Soils hold more carbon (C) than any other component of the terrestrial biosphere!

    Keywords: Project EDDIE

    1072

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    318

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    Stream Discharge Module (Project EDDIE)
    Stream discharge is a fundamental measure of water supply in stream systems. Low discharge may cause problems with water supply and fish passage, while high discharge may mean flooding. In this...

    Keywords: floodsProject EDDIEurbanizationstreams

    1198

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    Learning with All Your Senses: Mathematical Manipulatives Enhance Student Comprehension of Biological Models
    Handout for a session presentation on kinesthetic learning at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: Models3D models3D printingmanipulativeskinesthetic learning

    1099

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    264

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    Ethics of Metabolic engineering
    This is an ethical reflection for students on an issue in metabolic engineering and the potential for "home-brew" morphine. The case study asks students to reflect on material in the linked...

    Keywords: biostatisticsstatistical analysisavian malariaSummer Workshop 2018

    1270

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    682

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    Ethics in synthetic genomics
    This is an ethical reflection for students on an issue in genome engineering and the synthesis of potentially infectious viruses. The case study asks students to reflect on material in the linked...

    Keywords: biostatisticsstatistical analysisavian malariaSummer Workshop 2018

    1168

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    Ethics of Gene Editing
    This is an ethical reflection for students on an issue in gene editing. The case study asks students to reflect on material in the two linked articles. Also included is the grading rubric.

    Keywords: biostatisticsstatistical analysisavian malariaSummer Workshop 2018

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    Electronic Lab Notebooks: Options for Building Data Management and Quantitative Reasoning Skills
    Presentation on Electronic Notebooks and Lab Archives given at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: 2019 QUBES/BioQUEST Summer Workshopelectronic notebookselectronic lab notebookslab archives

    1145

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    271

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    Facilitating the implementation and adaptation of data-centric teaching resources by closing gaps in the Open Education Resource (OER) lifecycle
    Presentation on data-centric open educational resources given at the 2019 UBER-GRC

    Keywords: DIGdata-centric teaching

    1279

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    The Biology of Skin Color
    This film explores the hypothesis that different tones of skin color in humans arose as adaptations to the intensity of ultraviolet radiation in different parts of the world.

    Keywords: Resources @ HHMI - BioInteractivegene regulationgene expressionAnatomy & Physiologyhuman evolutionfilm

    3540

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    400

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    Answer Checking - Modified for Environmental Data Analysis/Statistics Course
    Modified answer checking worksheet from original BIOMAAP resource to include two additional questions relating to probability/P-values.

    Keywords: math attitudesanswer checkingResources @ BIOMAAP

    1168

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    Sequence Similarity Resource Adaptation: Exploring Ebola Virus
    This adaptation of the sequence similarity resource provides biology students with a basic set of bioinformatics concepts and tools. These concepts and tools are used to explore relationships...

    Keywords: phylogeneticsbioinformaticsEbolasequencingFASTANCBINIBLSEalgorithmsincubatorsBLASTmultiple sequence alignmentsequence similarityBLOSUM scoring matrixneighbor-joining distance matrixCourseSourcephylogram

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    Expanding the pipeline: Engaging urban secondary school and college students in science and the environment
    This speed talk will describe three education projects that engage urban minority students in science and the environment.
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    Summary of the National Academies Report on Data Science for Undergraduates
    Under the auspices of the National Academies, a Committee developed a consensus report regarding means to enhance undergraduate programs in the emerging discipline of data science.
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    Connecting Students to Citizen Science and Curated Collections
    This educational module utilizes the traditional plant collection experience to engage students with biodiversity data protocols and resources available in our information-rich digital age.

    Keywords: Biodiversityplantsnatural history collectionherbarium

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    Avian Censys Analysis
    This Swirl course uses ecological data of bird counts and habitat variables to estimate inter-observer variability and the relationship of birds with habitat variables.

    Keywords: ecologyregressionaverageserror estimates

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    Islands as a Tool for Teaching Ecology and Evolution
    Module for Ecology & Evolution course covering island biogeography principles, The scientific process and hypothesis testing, statistical methods (t-tests, regression), and online database use...

    Keywords: moduleResources @ AIM-UP!species richnessBiodiversityIsland biogeographyAIM-UP

    1380

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    256

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    Finding Selection in All the Right Places
    Lab introducing students to evolutionary genetics using bioinformatics and biocuration, published as GSA Learning Resource

    Keywords: geneticsbioinformaticssequencingNIBLSE

    1187

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    290

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    Seed Dispersal in Tropical Forests: Learning How Plants Move Around
    This module focuses on the dispersal of seeds from trees in fragmented tropical forests. Students use data from published studies to understand patterns of seed dispersal and apply these ideas to...

    Keywords: ecologyResources @ HHMI - BioInteractivecommunityplantsdiversityScientific Process

    1124

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    Search for the Missing Sea Otters
    National Center for Case Study Teaching in Science- using a progressive disclosure format, this case study teaches students how to apply ecological principles to a real-life ecological problem.

    Keywords: Community Ecologypopulation ecologypredationAlaskaSea otterkiller whaleOrcinus orcamarine mammalkelp bedpredatorecological energetics

    1136

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    249

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