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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Using Data in Limnology
    Poster on the interdisciplinary study of limnology as a "PEAK" integrative learning experience at Concordia Collegepresented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: student researchinterdisciplinary educationlimnologyeco-informaticsSummer Workshop 2018

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    My Fish Tank: An Active Learning Activity for Bacterial Nitrogen Metabolism
    This active learning activity introduces students to the second part of the nitrogen cycle, nitrification. In terrestrial and aquatic environments, bacteria from the Nitrosomonas and Nitrobacter...

    Keywords: nitrogen cyclenitrificationnitrifying bacteria

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    Self-Folding Videos
    In this collection, we showcase 3D-printed polyhedral nets constructed from polypropylene. Leveraging the unique property of this material, the designs incorporate living hinges that soften when...

    Keywords: 3D printingmagnetic fieldSelf-assemblyself-foldingnetpolyhedra

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    Simple, Accessible River-Based Field Investigation of Riverine Microplastics
    Scientists have discovered that microplastic pollution is ubiquitous in the environment, but the small size of these microscopic pollutants prohibits most people from recognizing their prevalence....

    Keywords: environmental sciencemicroplastic pollutionurban waterswasteenvironmental studiesfield-based learningfreshwater ecologywater qualityRiversSingle-use plasticfreshwater sciencewater ecologyField ExperiencesRiver Ecologyfield workThe Scientific MethodRiver Field Studies Networkfield courses

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    Nastic Movements in Plants
    This module introduces an osmotic model in the context of understanding plants' capability of rapidly adapting to changes in their environment. It is intended for an introductory biology audience.

    Keywords: plant physiologyhyperbolic equationsOpenStaxinterpreting modelsnastic movements

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    5-024-PhGreatLakes
    In this teaching modeling scenario, we demonstrate how lessons on salt-tank compartmental modeling can be used to predict phosphorus levels in the Great Lakes.

    Keywords: Great Lakeslimnologycomparmentpollutioncompartmental modelsphosphorous

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    Integrating the modeling of biogeochemical cycles and energy flow
    This in-class activity challenges students to create and then integrate models of how carbon, nitrogen, water and energy all move within an ecosystem. Using 15 provided standard pools, they work...

    Keywords: modelingecologyintegration4DEE FrameworkBiogeochemical cycles

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    3-055-FloatingBox-ModelingScenario
    In this scenario, we lead students through the process of building a mathematical model for a floating rectangular box that is bobbing up and down.

    Keywords: oscillationArchimedes’ Principlebuoancyoscillatory motionNewton's Second Law

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    2017-Sim-EtAl-Optimal control of a coupled tanks system with model-reality differences
    In this paper, an efficient computational approach is proposed to optimize and control a coupled tanks system.

    Keywords: optimal controlflowtankscoupled tanks

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    Have fish assemblages recovered from the legacy of acid rain?
    This module provides a framework for upper-level ecology students to learn about limiting factors for stream fish diversity, using data from Shenandoah National Park and gaining skills in...

    Keywords: Problem based learningdiversitycooperative learninglimiting factorsaquatic ecosystemspyramid examlab reports

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    Fluoxetine and Crab Behavior: Multiple Linear Regression
    This publication explores the behavioral influence of pharmaceutical pollution on a species of estuarine crab. Fluoxetine is a commonly prescribed, fairly effective anti-depressant and anti-anxiety...

    Keywords: ecologyaquatic ecosystemswater qualitypharmaceutical sciences

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    Exploring Marine Primary Productivity with Descriptive Statistics and Graphing in Excel
    In this activity, students use real water chemistry data and descriptive statistics in Excel to examine primary productivity in an urban estuary of the Salish Sea. They will consider how actual...

    Keywords: statisticsecologydataExcelgraphingBiochemistryOceanographymarine ecosystemsmarine ecologydescriptive statisticslong-term datasetsmarineMicrosoft Excelmarine biologyplanktonOutliersMarine ScienceqbccUsing ExcelphytoplanktonCreate graphsInterpret graphsConcepts in Statisticslarge datasetexplaining statisticsusing statisticsPacific NorthwestSalish Seaprimary productivitywater chemistryestuarygraphing in Excelformulas in Excelchlorophylltime-series plotsocean

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    Exploring Marine Primary Productivity with Descriptive Statistics and Graphing in Excel
    In this activity, students use real water chemistry data and descriptive statistics in Excel to examine primary productivity in an urban estuary of the Salish Sea. They will consider how actual...

    Keywords: statisticsecologydataExcelgraphingBiochemistryOceanographymarine ecosystemsmarine ecologydescriptive statisticslong-term datasetsmarineMicrosoft Excelmarine biologyplanktonOutliersMarine ScienceqbccUsing ExcelphytoplanktonCreate graphsInterpret graphsConcepts in Statisticslarge datasetexplaining statisticsusing statisticsPacific NorthwestSalish Seaprimary productivitywater chemistryestuarygraphing in Excelformulas in Excelchlorophylltime-series plotsocean

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    1-020-IceMelt-ModelingScenario
    We offer up the claim of a store catalog that its ice ball mold allows users to ``. . . make ice balls that outlast cubes and won't water drinks down.'' We ask students to build a mathematical...

    Keywords: sphereicemeltcube

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    2015-Joshi-EtAl-Optimal control of an SIR model with changing behavior through an education campaign
    We study stability analysis and use optimal control theory on the system of differential equations to achieve the goal of minimizing the infected population (while minimizing the cost).

    Keywords: SIR modelsvaccinepopulationwater treatmentsusceptibleeducation campaignminimizing costinfected

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    Lake Mixing Module (Project EDDIE)
    Students explore spatial and temporal patterns of lake mixing using high-frequency temperature data from lakes around the world.

    Keywords: stratificationProject EDDIE

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    Addressing Complex, Emergent Risks in 21st Century Natural-Human Systems
    Presentation on wicked problems in natural-human systems

    Keywords: climate changeSummer Workshop 2018environmental systemsfinancial risksystem of systems

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    5-025-SaltCompartments-ModelingScenario
    Model a phenomena in which salt mixtures from two tanks are mixed using several strategies.

    Keywords: compartmentsalttanks

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    HSI - Student Research Journal - Vol.3 Issue 1 - Summer 2021
    The Headwaters Research Experience students have produced some fascinating research throughout our 10-week program. We encourage all to read their reports in our Vol. 3 - Issue 1 - Summer 2021...

    Keywords: scientific methodscience education

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    One-way ANOVA in R with swirl
    One-way analysis of variance (ANOVA), following the text in Chapter 5 of Beckerman et al. (2017) Getting started with R: an introduction for biologists, 2nd edition.

    Keywords: R programming languageANOVAggplot2Swirl

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