You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Learning How to Make “Good Enough” Estimations
    The ability to estimate physical quantities is a useful skill that can help develop critical thinking and scientific literacy. This lesson provides an accessible way to teach students how to...

    Keywords: MeasurementestimationcommunicationProblem Solvinggroup workUnit conversion

    1375

    views

    375

    downloads

    0

    comments

    0

    adaptations

    BIO 263 Ecological Data Analysis
    Course materials for BIO 263 Ecological Data Analysis

    Keywords: Rdata analysisecological datasets

    1035

    views

    190

    downloads

    0

    comments

    0

    adaptations

    Yeast Cell Growth
    Numbers Count resource using Excel for data analysis

    Keywords: data analysisExcelNumbers Count

    1316

    views

    383

    downloads

    0

    comments

    0

    adaptations

    R for biologists
    An introductory guide to data analysis in R for life sciences researchers.

    Keywords: R

    1037

    views

    407

    downloads

    0

    comments

    0

    adaptations

    Chi-Square analysis of two point test cross data
    This flash tutorial simulates analysis of a 2 point test cross and will walk you through the analysis of two hypothetical traits.

    Keywords: geneticssimulationchi-squaredlinkagetest crossrecombinationdemonstrationin-class activityproblem set

    1378

    views

    226

    downloads

    0

    comments

    0

    adaptations

    Does Organelle Shape Matter?: Exploring Patterns in Cell Shape and Structure with High-Throughput (HT) Imaging
    Organelle structure has been studied and visualized for decades; however, publicly available databases that use improved high-throughput microscopy of gene-edited cell lines have recently...

    Keywords: modelingcase studymicroscopystructureOrganellesHigh-throughput (HT)Endoplasmic Reticulum (ER)Fluorescent microscopyHuman Cell Biology

    4732

    views

    470

    downloads

    0

    comments

    0

    adaptations

    2018-Weber_Theers_Surmann_Ligges_Weihs-Sensitivity Analysis_of_Ordinary_Differential_Equation_Models
    This report will focus on the sensitivity analysis of ordinary differential equation (ODE) models since they can be used to model so-called Low Frequency Oscillations (LFOs).

    Keywords: sensitivityregressionparameter estimationsystemlow frequency oscillationsoscillations

    144

    views

    44

    downloads

    0

    comments

    0

    adaptations

    Active Learning: Developing Self-Directed Learners Through Strong Intellectual Engagement
    When they were students, many current science instructors learned through traditional lectures. This mode of passive knowledge transmission has been shown to be less effective for student learning...

    Keywords: active learningmetacognitionconstructivism

    3237

    views

    268

    downloads

    0

    comments

    0

    adaptations

    2015-H_Sayama-Intro to Modeling and Analysis of Complex Systems
    Introduces students to mathematical/computational modeling and analysis developed in the emerging interdisciplinary field of Complex Systems Science.

    Keywords: textbooktext

    118

    views

    56

    downloads

    0

    comments

    0

    adaptations

    Understanding Protein Domains: A Modular Approach
    An understanding of protein structure, function, and interaction is central to biochemistry. One angle into this topic is to engage students in considering protein domains as modules that develop...

    Keywords: Protein Structure

    1480

    views

    328

    downloads

    0

    comments

    0

    adaptations

    5-024-PhGreatLakes
    In this teaching modeling scenario, we demonstrate how lessons on salt-tank compartmental modeling can be used to predict phosphorus levels in the Great Lakes.

    Keywords: Great Lakeslimnologycomparmentpollutioncompartmental modelsphosphorous

    277

    views

    287

    downloads

    0

    comments

    0

    adaptations

    1-003-CollegeSavings-ModelingScenario
    We present a modeling opportunity for students in which they have to plan and model for saving for a child's complete college education.

    Keywords: collegesavingsinterest ratecollege costsensitiviyty

    284

    views

    196

    downloads

    0

    comments

    0

    adaptations

    Biobyte 2 - Exploratory data analysis
    This short activity can be used to introduce the concept of exploratory data analysis and get participants to think about how this data science strategy is complementary to having students...

    Keywords: data sciencedsube

    1034

    views

    692

    downloads

    0

    comments

    0

    adaptations

    Statistical Exploration of Climate Data
    In this module the students will learn some basic concepts in statistical thinking about data, with emphasis on exploratory data analysis.

    Keywords: modulelinear regressioncase studyclimate datamoving averagesin-class activity

    1160

    views

    1116

    downloads

    0

    comments

    0

    adaptations

    Teaching R with Swirl
    Session presentation on using Swirl, an interactive platform for learning and teaching R in the R console

    Keywords: Rdata analysisprogrammingSummer Workshop 2018Swirl

    2429

    views

    361

    downloads

    0

    comments

    0

    adaptations

    AIMS- Analyzing Images to learn Mathematics and Statistics - studying leaf cutter ants to learn linear regression
    This is a teaching resource that uses fascinating images and videos of leaf cutter ants foraging in Panama to provide an engaging context for students to learn about mathematics and statistics.

    Keywords: statisticsmoduleecologydata analysisleaf cutter antsmorphologyforagingallometryeusociallinear regressionimage analysisin-class activitylab protocolproject

    1757

    views

    266

    downloads

    0

    comments

    0

    adaptations

    Make It Stick: Teaching Gene Targeting with Ribbons and Fasteners
    Manipulating gene expression is a commonly used tool to study the effect of a single gene or the hierarchy of gene networks in many different biological disciplines. When working with mice, the...

    Keywords: mathematical modelhomologous recombinationCre/loxgene targeting

    1550

    views

    227

    downloads

    0

    comments

    0

    adaptations

    The Molecular CaseNet Pipeline for Authoring, Piloting, and Evaluating Molecular Case Studies
    This poster provides an overview of the pipeline for authoring, piloting, and reviewing molecular case studies for publication in Molecular CaseNet.

    Keywords: resources @ Molecular CaseNet

    269

    views

    73

    downloads

    0

    comments

    0

    adaptations

    Box of Lessons: A Toolkit for Introducing Students to Biomolecular Structure and Function
    This is a poster describing a collection of open educational resources that were developed by faculty participating in the Molecular CaseNet Faculty Mentoring Network in Spring 2022. The collection...

    Keywords: bioinformaticsbiomolecular structureProtein Data Bankresources @ Molecular CaseNet

    402

    views

    90

    downloads

    0

    comments

    0

    adaptations

    2017-Fred_Adler-Mathematically Modeling Asthma
    Our Asthma models have examined how a viral infection can tip the immune system into a different state, with the potential to predispose an individual to future asthma

    Keywords: infectionasthmaimmune responserhinovirus

    131

    views

    94

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search