You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    CURE-all: Large Scale Implementation of Authentic DNA Barcoding Research into First-Year Biology Curriculum
    Growing calls in science education reform have emphasized wide-scale engagement of first-year undergraduate students in authentic research experiences; however, large course enrollments, inadequate...

    Keywords: phylogeneticsbioinformaticsBiodiversityprocess of sciencetaxonomyPCRDNADNA sequencegel electrophoresis

    5893

    views

    3833

    downloads

    0

    comments

    0

    adaptations

    Design Your Own Flow Cytometry Experiment: A Four-Week Inquiry Laboratory
    Due to its importance to the field, flow cytometry should be one of the hallmark methods a student learns in the lab portion of an undergraduate immunology course. Flow cytometry is a classic lab...

    Keywords: Immunologyexperimental designFlow cytometryMice

    4012

    views

    632

    downloads

    0

    comments

    0

    adaptations

    Teaching RNAseq at Undergraduate Institutions: A tutorial and R package from the Genome Consortium for Active Teaching
    Next-generation sequencing is radically changing the study of biology, but there are currently few resources aimed at teaching the required laboratory and data-analysis skills to undergraduate...

    Keywords: statisticsbioinformaticsRNAseqgene expressioncomputer programming

    3391

    views

    561

    downloads

    0

    comments

    0

    adaptations

    Data Analysis Recitation Activities Support Better Understanding in SEA-PHAGES CURE
    Course-based undergraduate research experiences (CUREs) are widely known to improve student learning outcomes in the sciences. Undergraduate students have a particularly difficult time interpreting...

    Keywords: bacteriophageDNA extractionGel analysisPhage purificationTiter calculationViral replicative growth

    1428

    views

    726

    downloads

    0

    comments

    0

    adaptations

    Outside the Norm: Using Public Ecology Database Information to Teach Biostatistics
    Biology students’ understanding of statistics is incomplete due to poor integration of these two disciplines. In some cases, students fail to learn statistics at the undergraduate level due...

    Keywords: biostatisticshypothesis testingexperimental design

    918

    views

    136

    downloads

    0

    comments

    0

    adaptations

    The Case of the Missing Strawberries: RFLP analysis
    While solving the fictional mystery of the missing strawberries, students are engaged in a guided-inquiry lesson featuring small-group and class discussions, hands-on activities, and laboratory...

    Keywords: process of scienceDNAforensicsgel electrophoresisMolecular genotypingRestriction endonucleaseRestriction enzymeRestriction fragment length polymorphismRFLP

    2584

    views

    619

    downloads

    0

    comments

    0

    adaptations

    BEDE Network Data Science Skills Curriculum Map
    The Biological and Environmental Data Education (BEDE) Network has produced this data science skills curriculum map as a flexible tool to help instructors highlight data science skills that they...

    Keywords: quantitative skillsscientific literacyCurriculum developmentdata science skills trainingdata literacy skills

    392

    views

    102

    downloads

    0

    comments

    0

    adaptations

    Understanding the Quantitative and Computational Skills of Incoming Biology Students
    Presentation given as part of a Minisymposium at BEER 2015.

    Keywords: assessmentBioSQuaRE

    1379

    views

    204

    downloads

    0

    comments

    0

    adaptations

    Coevolution or not? Crossbills, squirrels and pinecones
    This case reinforces the concept of coevolution as a reciprocal change in genetic structure between or among two or more populations, by having students analyze and interpret data, build a...

    Keywords: fitnessCoevolutionCo-adaptation

    2757

    views

    894

    downloads

    0

    comments

    0

    adaptations

    "I Really Enjoy These Annotations:" Examining Primary Biological Literature Using Collaborative Annotation
    Critically reading and evaluating claims made in the primary literature are vital skills for the future professional and personal lives of undergraduate students. However, the formal presentation...

    Keywords: Stem cellsAdult neurogenesisCRISPR gene editing

    4190

    views

    423

    downloads

    0

    comments

    0

    adaptations

    Maintenance of Phenotypic Polymorphism and a Scientist Spotlight Featuring Dr. Swanne Gordon
    In this lesson students interpret graphical evidence of frequency-dependent selection in the wood tiger moth, then make long-term evolutionary predictions. They then read and reflect on an...
    805

    views

    286

    downloads

    0

    comments

    0

    adaptations

    The Power of Place: A Course-Based Undergraduate Research Experience Studying Urban Ecology, Local Apple Trees and Disease Susceptibility
    Course-based Undergraduate Research Experiences (CUREs) offered early in an undergraduate student’s career have the potential to include a greater number and diversity of students than...

    Keywords: Disease ecologyurban ecologyUrban food forestsUrban heat islandsGenetic resistance

    1949

    views

    130

    downloads

    0

    comments

    0

    adaptations

    Investigating Cell Signaling with Gene Expression Datasets
    Modern molecular biology is a data- and computationally-intensive field with few instructional resources for introducing undergraduate students to the requisite skills and techniques for analyzing...

    Keywords: genomicstranscriptionsignaling

    7642

    views

    365

    downloads

    0

    comments

    0

    adaptations

    Isolation and Functional Analysis of a Pancreatic Enzyme in an Introductory Student Lab
    Structure and function are correlated at all levels of biology. This topic is typically addressed early in an undergraduate class in general or molecular biology before students have gained much...

    Keywords: Protein StructureproteaseEnzymechemical bondscatalysissolubility

    3502

    views

    187

    downloads

    0

    comments

    0

    adaptations

    Why Meiosis Matters: The case of the fatherless snake
    A compelling reason to learn something can make all the difference in students’ motivation to learn it.  Motivation, in turn, is one of the key attitudes that drives learning.  This story...

    Keywords: meiosismitosissex determinationAsexual reproductionParthenogenesis

    8839

    views

    1136

    downloads

    0

    comments

    0

    adaptations

    Ain't No Mountain Pine Enough: A Case Study of How Mountain Pine Beetles are Affecting Ecosystem Processes
    This case study engages students in generating hypotheses and predictions, analyzing and interpreting data, critically evaluating contrasting results in science, and thinking about feedbacks...

    Keywords: population biologycarbon cyclingSpecies-habitat interactions

    1598

    views

    448

    downloads

    0

    comments

    0

    adaptations

    Backward Design with Digital Data
    Best practices for designing educational modules using biodiversity data

    Keywords: data in the classroombackward designbiodiversity collections

    1617

    views

    383

    downloads

    0

    comments

    0

    adaptations

    QUBES – A virtual synthesis center catalyzing change in undergraduate quantitative biology education
    Presentation about QUBES given at HHMI Constellation Meeting: Advancing science students mastery of quantitative skills.

    Keywords: quantitative biology education

    1087

    views

    159

    downloads

    0

    comments

    0

    adaptations

    A Laboratory Module That Explores RNA Interference and Codon Optimization Through Fluorescence Microscopy Using Caenorhabditis elegans
    Scientific research experiences are beneficial to students allowing them to gain laboratory and problem-solving skills, as well as foundational research skills in a team-based setting. We designed...

    Keywords: microscopyC. elegansquantitative analysisinquiry-based learninggene expressionRNA interferenceCodon UsageLaboratory Module

    2483

    views

    172

    downloads

    0

    comments

    0

    adaptations

    Using computational molecular modeling software to demonstrate how DNA mutations cause phenotypes
    Students require a deep understanding of the central dogma before they can understand complex topics such as evolution and biochemical disorders. However, getting undergraduate biology students to...

    Keywords: Protein Structurecomputational modelingcentral dogmaplant leaf structurePhenotype/Genotype

    1934

    views

    511

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search