You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Cell Signaling Pathways - a Case Study Approach
    Signaling and gene expression are fundamental to cell biology and developmental biology. Although these topics are highly interrelated, they typically appear in separate units in a course. We use a...

    Keywords: signal transductiongene expressionCell communicationgenetic disordersregulation of enzyme activity

    5052

    views

    2523

    downloads

    0

    comments

    0

    adaptations

    Hewlett Foundation - Bates Final Evaluation Report 2021
    Evaluation findings of Hewlett Foundation award to Bates College

    Keywords: QUBES HubSTEM EvaluationSCORE Network

    834

    views

    240

    downloads

    0

    comments

    0

    adaptations

    2012-Campbell-EtAl-Parameter estimation in differential equation models with constrained states
    We introduce a method to estimate parameters and states from a differential equation model while enforcing interpretability constraints such as monotone or non‐negative states.

    Keywords: chemical engineeringsmoothing-based relaxation method

    165

    views

    29

    downloads

    0

    comments

    0

    adaptations

    T2R38 taste receptor polymorphisms underlie susceptibility to upper respiratory infection
    Article presenting evidence that the bitter taste receptor T2R38 regulates the mucosal innate defense of the human upper airway.
    585

    views

    104

    downloads

    0

    comments

    0

    adaptations

    Using Synthetic Biology and pClone Red for Authentic Research on Promoter Function: Introductory Biology (identifying new promoters)
    Students often memorize the definition of a transcriptional promoter but fail to fully understand the critical role promoters play in gene expression. This laboratory lesson allows students to...

    Keywords: bacteriasynthetic biologygene regulationtranscriptionstudent researchcentral dogmacloningpromoterreporter gene/protein

    2706

    views

    573

    downloads

    0

    comments

    0

    adaptations

    2016-Barbarossa-Kuttler-Mathematical Modeling of Bacteria Communication in Continuous Cultures
    This paper presents a simple system of delay differential equations (DDEs) for quorum sensing of Pseudomonas putida with one positive feedback plus one (delayed) negative feedback mechanism.

    Keywords: gene regulatory networkschemostatbifurcationNumerical Simulationquorum sensing

    108

    views

    50

    downloads

    0

    comments

    0

    adaptations

    Visualizing your program for funding success: Logic & Theory of Change Models
    Session presentation on program evaluation at the 2019 BioQUEST & QUBES Summer Workshop

    Keywords: fundingevaluation2019 QUBES/BioQUEST Summer Workshoptheory of change

    1048

    views

    247

    downloads

    0

    comments

    0

    adaptations

    Birthday Problem and Class Phenotypic Probabilities
    An Excel workbook exploring two related applications, the Birthday Problem and Class Phenotypic Probabilities. Students enter their own phenotypes into the workbook.

    Keywords: ExcelResources @ ESTEEMphenotypic probabilityallelic frequency

    1000

    views

    207

    downloads

    0

    comments

    0

    adaptations

    Assessment of Science Inquiry
    Resource from the 2015 BioQUEST Summer Workshop

    Keywords: assessmentconceptsSoTL

    1555

    views

    439

    downloads

    0

    comments

    0

    adaptations

    The Power of Place: A Course-Based Undergraduate Research Experience Studying Urban Ecology, Local Apple Trees and Disease Susceptibility
    Course-based Undergraduate Research Experiences (CUREs) offered early in an undergraduate student’s career have the potential to include a greater number and diversity of students than...

    Keywords: Disease ecologyurban ecologyUrban food forestsUrban heat islandsGenetic resistance

    1864

    views

    110

    downloads

    0

    comments

    0

    adaptations

    Preparing Student Study Guides through Peer Collaboration in the Technological Era
    Incorporating active learning exercises into large lecture courses is particularly challenging, especially when it comes to examination preparation materials. Traditionally, study guides are used...

    Keywords: active learningDiscussionStudy Skills

    1377

    views

    221

    downloads

    0

    comments

    0

    adaptations

    Survey Findings:: Social Justice Dialogues in STEM Education LC
    Survey findings for the learning community (LC), Social Justice Dialogues in STEM Ed, facilitated by Drs. Bryan Dewsbury (Florida Institute of Technology) and Desiree Forsythe (Rochester Institute...

    Keywords: evaluation

    292

    views

    66

    downloads

    0

    comments

    0

    adaptations

    An Active Textbook Converts "Vision and Tweak" to Vision and Change
    Multiple reports over more than a century have documented the problems with the way introductory biology has been taught in most colleges and universities. An influential recent report, Vision and...

    Keywords: Vision and Changeactive learningintroductory biologyFlipped classroomUndergraduatecore competenciescore conceptsactive textbookcurriculum reform

    899

    views

    89

    downloads

    0

    comments

    0

    adaptations

    Using Pathway Maps to Link Concepts, Peer Review, Primary Literature Searches and Data Assessment in Large Enrollment Classes: An example from teaching ecosystem ecology
    As with many other complex topics, teaching ecosystem ecology can be particularly difficult in terms of helping students understand the relationships between the various component parts. We...

    Keywords: energyecosystemNutrientsPathway

    1215

    views

    490

    downloads

    0

    comments

    0

    adaptations

    Climate of Change (Unit 5: Systems@Play) in nonmajors Environmental Science
    I implemented Unit 5 of the "Climate of Change" module into two weeks of my nonmajors Environmental Science course to cover the concepts of atmospheric science, climate change, and data...
    1115

    views

    249

    downloads

    0

    comments

    0

    adaptations

    Identifying Groundwater Discharge Dynamics into Stream Habitat Assessments
    Groundwater contributions are overlooked in many habitat assessments, even though their ecological and water quality importance to streams has been broadly recognized. This lab encourages students...

    Keywords: landscape ecologyriver systemsRiver Field Studies NetworkGroundwater - Surface Water Exchangegroundwater seepsstream temperature

    671

    views

    319

    downloads

    0

    comments

    0

    adaptations

    Survey Findings:: Social Justice Dialogues in STEM Education Fall 2022 LC
    Survey findings for the learning community (LC), Social Justice Dialogues in STEM Ed, facilitated by Drs. Desiree Forsythe (Chapman University) and Megan Jones (University of Rhode Island) – with...

    Keywords: evaluation

    291

    views

    60

    downloads

    0

    comments

    0

    adaptations

    2012-Tweedle-Smith-Mathematical model of Bieber Fever-The most infectious disease of our time
    We develop a mathematical model to describe the spread of Bieber Fever, whereby individuals can be susceptible, Bieber-infected or bored of Bieber.

    Keywords: infectious diseasediseaseinfectionmediaJustin BieberBieber feversymptomsboredreproductive ratio

    110

    views

    41

    downloads

    0

    comments

    0

    adaptations

    Teaching the Biological Relevance of Chemical Kinetics Using Cold-Blooded Animal Biology
    This lesson plan was created to support non-chemistry major students in making connections between chemical kinetics and biological systems. Chemical kinetics is often viewed by students as an...

    Keywords: kineticsMetabolismEctothermPoikilotherm

    1160

    views

    400

    downloads

    0

    comments

    0

    adaptations

    Open Practices Learning Community (OPLC) Post Survey Findings
    Post survey findings of a six-week open practices learning community facilitated by Dr. Karen Cangialosi to explore different components of open practices from April 07, 2021 through May 12, 2021.

    Keywords: STEM Evaluation

    647

    views

    191

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search