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    Published Avida-Ed article
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    Draft Version: Energy Balance Models
    This module introduces the student to the process of mathematical modeling.
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    PLANT Talking Points: Popcorn, endosperm and the foods we eat...
    This resource connects botany to everyday life by way of explaining what common foods we eat really are.

    Keywords: botanyplants

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    Use of Peerwise and Twitter in Open Pedagogy
    This presentation will demonstrate the use of two open tools (Peerwise and Twitter) to engage students in creating and discussing course content.

    Keywords: twitterOER

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    The Morning After: A Case Study of the Impacts of HIV on Sexual Minority Populations
    Poster on a case study around the experiences of the LGBT community related to HIV presented at the 2018 QUBES/BioQUEST Summer Workshop
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    Circle Train Problem TCM 2018_Hernandez.pdf - Google Drive
    In this math modeling lesson, students build mathematical models for the horizontal and vertical position of a train moving along a circular track. The math topics includes transformations of...
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    Using Jetstream for Bioinformatics
    A pre-class screencast for UCSD’s Foundations of Bioinformatics course (BGGN-213).
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    Video Tutorials for Computational Genomics
    YouTube videos by Laura Harris on a variety of genomics and bioinformatics topics.
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    UniProt
    Brief description of UniProt and its databases and features
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    What is bioinformatics?
    Short description of what bioinformatics is, it's potential applications, and what it is not.
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    Assessment of Science Inquiry
    Resource from the 2015 BioQUEST Summer Workshop
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    Using primary literature to teach data literacy
    Presentation by Bridget Conneely made as part of the "Bringing Research Data to the Ecology Classroom: Opportunities, Barriers, and Next Steps” Session at the Ecological Society of American...
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    Island Biogeography
    This Excel workbook demonstrates the principles of the MacArthur-Wilson theory of Island Biogeography. It allows the user to define the mainland species pool, area of the island, and distance of...
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    Quantifying Uncertainty and Distinguishing Data Sets in Introductory Physics
    Physics labs are moving increasingly to open-ended experiments where students develop experimental physics skills, rather than verify textbook physics concepts. This sequence of activities sets the...
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    A rainforest with a gold chain? The impacts of gold mining on the trophic web of an Amazonian rainforest of SE Peru
    The use of mercury in artisanal gold mining affects aquatic and terrestrial food webs in the Peruvian Amazon. Learn about bioaccumulation, explore data on mercury deposition in vegetation and how...
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    2020-Teaching Module-Applying Separation Of Variables
    This is one of several Teaching Modules prepare by the Principal Investigates of SIMIODE’s National Science Foundation grant and offered in 2020. The material offered is a complete narrative of how...
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    2018-David_Bourne-Pharmacokinetics – Source Material
    This is a rich source of pharmacokinetics modeling activities and data. These are syllabus notes with homework assignments listed.
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    2012-Yuan_Yuan-A coupled plankton system with instantaneous and delayed predation
    We present two simple plankton population models: one has instantaneous predation, another has delayed predation.
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    2011-Therese-Keane-Combat modelling with partial differential equations
    We present work seeking to more realistically represent troop dynamics and to enable a deeper understanding of the nature of conflict.
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    2008-Huet-Deffuant-Differential Equation Models Derived from an Individual-Based Model Can Help to Understand Emergent Effects
    We study a model of primacy effect on individual's attitude. Typically, when receiving a strong negative feature first, the individual keeps a negative attitude whatever the number of moderate...
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