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    Maria vs Malaria - AR Adaptation
    This case study focuses on a specific enzyme Lactate Dehydrogenase (LDH) in the malarial parasite as a target for treating malaria. Students will be able to view selected molecular views from the...

    Keywords: bioinformaticsAugmented RealityLarge class sizemolecular visualizationstructure-functionuniprotProtein Data BankMolecular Case StudyMolecular CaseNet

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    2014-Hrydziuszko-EtAl-Mathematical Two-compartment Model of Human Cholesterol Transport
    We develop a two-compartment mathematical model to investigate cholesterol transport in the circulatory system and its de novo synthesis in the liver.

    Keywords: metabolic syndromecompartmentcholesteroltwo-compartment modelcholesterol transport

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    2010-Shianga-EtAl-Computational model of the human glucose-insulin regulatory system
    A computational model of insulin secretion and glucose metabolism for assisting the diagnosis of diabetes mellitus in clinical research is introduced. The

    Keywords: glucose tolerance testsum of squared residualsmultiple shooting methodcost function

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    Integrating the modeling of biogeochemical cycles and energy flow
    This in-class activity challenges students to create and then integrate models of how carbon, nitrogen, water and energy all move within an ecosystem. Using 15 provided standard pools, they work...

    Keywords: modelingecologyintegration4DEE FrameworkBiogeochemical cycles

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    COVID-19: Molecular Basis Infection Revisited One Year into the Pandemic
    This adaptation was written in Spring 2021 exactly one year after the original case and includes explorations of the emerging mutations within the spike protein

    Keywords: infectionvaccinemolecular visualization and analysisCOVID19PDBSARS-CoVMolecular Case Studyvariantsantibody

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    Examining human impacts on tusk evolution in elephants using authentic research data
    In this activity students explore and analyze real, authentic research data paired with HHMI’s “Selection for Tuskless Elephants” video in a hands-on investigation of human impacts on elephant...
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    "Got Algae?" A Sorting Game for Introducing the Weird and Wonderful Diversity of Algae
    Algae are a fascinating and diverse organismal group, with global ecological importance, a storied evolutionary history and deep connections to both contemporary and historical human societies. Yet...

    Keywords: phylogenyBiodiversityphotosynthesisalgaeseaweedmonophyly

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    2017-Agmour-EtAl-Optimization of the Two Fishermen's Profits Exploiting Three Competing Species Where Prices Depend on Harvest
    The main purpose of this work is to define the fishing effort that maximizes the profit of each fisherman, but all of them have to respect two constraints: the first one is the sustainable...

    Keywords: FishingharvestNash equilibriumoptimizeprofits

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    2015-Boggess-EtAl-Mathematical Modeling in Ecology - Simulating the Reintroduction of the Extinct Passenger Pigeon
    To determine under which conditions a Passenger Pigeon could survive a reintroduction into a natural habitat, we used two types of models.

    Keywords: simulationagent-based modelingallee_effectPassenger Pigeonsforest envirnomentHolling Type III functional responseBio-energeticstree distributions

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    2002-Dietz-Heesterbeek-Daniel Bernoulli-epidemiological model revisited
    The seminal paper by Daniel Bernoulli published in 1766 is put into a new perspective. After a short account of smallpox inoculation and of Bernoulli’s life, the motivation for that paper and its...

    Keywords: life tableepidemicsmallpoxDaniel Bernoullicompeting riskinoculation

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    The Evolution (and Coevolution) of Flowering Plants Virtual Classroom
    In this lab, you will explore the diversity of flower and fruit adaptations that have evolved to accomplish pollination and seed dispersal and you will investigate the coevolution of angiosperms...

    Keywords: digital resourcespollination biologynatural history collectionsFloral Diversity

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    Movement: Nature's Flying Machines (Online)
    Adapted for online learning: In this lab, you will explore the physics of flight, the adaptations that make powered flight possible, and the evolution of powered flight in vertebrates and...

    Keywords: citizen sciencequantitative skillsDigital RepositoryFlight

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    Evolution
    This video explores the way evolution happens via natural selection in the context of the microbial world. Viruses and bacteria are discussed. We will see how evolution can be simulated in a...

    Keywords: videosEvolutionNatural SelectionScience Forwardmicrobes

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    The Insect Predation Game
    Laboratory experiment included in Teaching Issues and Experiments in Ecology (TIEE) Volume 4 The main learning objective of this module was to tie together what students had learned during the...

    Keywords: simulationpredator-preypredation ecology

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    Plotting Cranial and Spinal Nerve Pathways in a Human Anatomy Lab
    Hands-on experiences with cadavers, animal dissections, or plastic models are effective at improving student learning and attitudes in human anatomy courses. The hands-on experience allows students...

    Keywords: human anatomyNervous systemBrainCranial nerveNerveSpinal cordSpinal nerve

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    Applying ESA’s 4DEE framework to guide the development of ecological literacy for non-majors
    The Four-Dimensional Ecological Education (4DEE) framework, endorsed by the ESA Governing Board in November 2018, is the culmination of 30 years of work by the ecology community to clearly define...

    Keywords: ecology4DEE Frameworkecological literacy

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    Ethics in Synthetic Biology
    This collection of five activities provide students with an introduction to thinking about ethical concerns in human genome synthesis, gene editing, metabolic engineering, and synthetic genomes.

    Keywords: biostatisticsstatistical analysisavian malariaSummer Workshop 2018

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    Investigating human impacts on stream ecology: locally and nationally
    TIEE Module- How does nutrient pollution impact stream ecosystems locally and nationally? This is an adaptation of the module that includes statistical testing and links sections to a lab report...
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    Investigating Human Impacts on Hawaiian Fishpond Ecology
    Examining water quality (including fertilizer residue, nutrients, soil erosion, and invasive plants) on a Hawaiian fishpond ecosystem.

    Keywords: sustainabilityecologywater quality and resource allocationocean sustainabilityinvasive plantsfisheries science

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    Investigating human impacts on local Hawaiian stream ecology
    Students learn about stream ecology on the island of Hawaii using data available through USGS and University of Hawaii websites and develop an understanding for potential stream changes due to...

    Keywords: climateStream ecologyHawaii CountyTopographyMap ReadingRainfall

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