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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Using Survey123 to Map Physical Habitat Characteristics, Watershed Activities, and Disturbances
    In this lesson, students are introduced to the idea and practice of “remote sensing” and provided with hands-on, field-based experience using standardized stream habitat assessment protocols (the...

    Keywords: GISmappingremote sensingRiver Field Studies Networkriparian habitat assessmentGPSSurvey123National Rivers and Streams Assessment (NRSA)watershed activitieswatershed disturbances

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    Assessing Socioeconomic Trends in Tree Cover and Human Health in Urban Environments
    In this exercise, students use a combination of publicly available data and tree cover data that they generate using iTree Canopy to test whether tree cover is equitably distributed within the city...

    Keywords: social justiceSimple Linear Regressionenvironmental justiceGeographic Information System (GIS)Using ExcelConnection to PlaceredliningEcosystem Servicesurban tree coverurban environments

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    Ripped from the Headlines! Creating Case Studies from Primary Literature.
    Poster on using case studies developed from primary literature presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: case studyprimary literatureSummer Workshop 2018

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    Cold blood and wet skin in hot and dry secondary forests. How do amphibian traits determine persistence in secondary forests?
    Students will synthesize information from biological and physiological traits of amphibians and characteristics of secondary forests in the tropics to form hypotheses about persistence of...

    Keywords: life historyconservation biologyphysiological ecologyamphibianland use changeEctothermsecondary foresttrait-based ecology

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    Sin Nombre Hantavirus in the US
    A module guiding students through the review of different biodiversity data sources to identify patterns in the distribution of the Sin Nombre Hantavirus in the United States. English, Spanish, and...

    Keywords: Resources @ AIM-UP!infectious diseasespublic healthnatural history collectionsWildlife Diseasedigitized natural history collectionsenglishSpanishzoonotic diseaseshantavirusMEPAPortuguesetranslated

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    2017-Bonin-EtAl-Mathematical modeling based on ordinary differential equations - promising approach to vaccinology
    As a proof of concept, we developed a model of the immune response to vaccination against the yellow fever. Our simulations have shown consistent results when compared with experimental data...

    Keywords: immune systemyellow fevercomputational immunologycomputational vaccinology

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    2011-Yanyu_Xiao-Study of Malaria Transmission Dynamics by Mathematical Models
    The novelty lies in the fact that different distribution functions are used to describe the variance of individual latencies. The theoretical results of this project indicate that latencies reduce...

    Keywords: infectious diseaseinfectionmalarialatencyspatial dispersalmulti-species

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    Uncovering Hidden Figures of Natural History Collections Using Digital Data Sleuthing & Storytelling
    In this presentation we will introduce a series of modules meant to train the next generation of scientists to be data sleuths and storytellers, engaging learners in authentic research experiences...

    Keywords: natural history museumssocial justicedigitized natural history collectionsLDC2023hidden figures

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    2011-Lorelei_Koss-Sustainability_in_a_differential_equations_course_case_study_of_Easter_Island
    Easter Island is a fascinating example of resource depletion and population collapse, and its relatively short period of human habitation combined with its isolation lends itself well to...

    Keywords: differential equationssustainabilitypopulationEaster Islandcollapseenvironmental collapse

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    2020-Chen_Et_Al-MathModel_Simulation_Phase-Based_Transmissability_Corona_Virus
    In this study, we developed a Bats-Hosts-Reservoir-People transmission network model for simulating the potential transmission from the infection source (probably be bats) to the human infection.

    Keywords: basic reproduction numbercoronavirusnext generation matrixtransmissibilitynovel coronavirus

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    5-020-ParacetamolAbsorption-ModelingScenario
    We offer drug absorption data on paracetamol, an analgesic pain reliever, for two different sets of patients, vegetarian and non-vegetarian. Students build a two compartment model for plasma and...

    Keywords: paracetamolanalgesicvegetariannon-vegetarian

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    Coyote Habituation and a Scientist Spotlight on Dr. Christopher Schell
    Dr. Christopher Schell is an ecologist who uses a variety of techniques to study mammalian carnivores in urban areas. This scientist spotlight uses graphs from his study on parental habituation to...

    Keywords: conservation ecologyanimal behaviorurban ecologyInterpreting GraphsBLACK SCIENTISTS IN STEMcoyotes

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    Why does Blood Flow Change? Investigating the Math of Blood Flow Dynamics
    This collection of activities explores the relationship between blood flow, pressure, and the factors of resistance through graphs and modeling direct and inverse variation.

    Keywords: quant biographingRatiosmathassessmentcollege algebraundergraduate educationphysiologyAnatomyhuman biologyvariationCardiovascular physiologyAnatomy & Physiologylab activityOpenStaxqbccmanipulate equationsUnderstanding fractionsChoosing modelsUnderstanding ratesEstimating answersUse elementary functionsCreate graphsInterpret graphsRates and ProportionsSolving Equations and Inequalities

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    Water Quality Investigation (Project EDDIE)
    This multi-part module aims to help you learn about water quality implications by understanding the variability of concentrations of nitrate in stream water through the evaluation of real-time data...

    Keywords: dataExcelwaternitrogenUSGSProject EDDIEnitrogen cycle

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    Climate Change Module- Beck Modifications (Project EDDIE)
    Students explore how climate is changing from the recent record
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    Implementing active learning approaches into an upper-division biology course
    In this essay, we present our strategy for implementing active learning strategies into an upper division course on Human Genetics. Our principal goal was to shift from a traditional didactic...

    Keywords: human biologyPedigree analysisRare genetic diseases

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    Pesticides in My Smoothie Bowl?
    Teaching resources, especially active learning pedagogy, are scarce for toxicology compared to what is available for other disciplines. Ecological and human health risk assessment are...

    Keywords: data analysistoxicologychemical toxicityecological risk assessmenthuman risk assessmentpesticide

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    1-131-CaffeineElimination-ModelingScenario
    We model the concentration of caffeine eliminated from the human body at a rate proportional to the concentration. This is a ``first-order reaction'' in the language of pharmacokinetics -- the...

    Keywords: caffeineeliminationpharmacokineticsdrug

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    Healing the scars: Tropical rainforest carbon cycling. Does it matter which tree species you plant?
    This online module explores how differences in traits of tropical tree species translate into differential effects on the carbon cycle, integrating ecological information across scales and the...

    Keywords: climate changecarbon cyclingtropical biology4DEE Frameworkforest restorationtropical tree speciessoil carbon

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    Immunity and Vaccine Action
    From the cellular level on up, being aware of your interactions can help you stay safe. This resource addresses fundamental immunology and infectious disease concepts through a historical...

    Keywords: immunology educationvaccine literacyvaccine hesitancy

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