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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Writing Microbiology Resource Announcements (MRA)
    This resources provides a framework for students to write a Microbiology Resource Announcement, collaboratively.

    Keywords: phageBioinformatics and GenomicsGenome announcementmanuscriptMRA

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    Vegetation Greening: A Snapshot from the Andean Tropics
    This online module explores how satellite images are used to study vegetation greenness and, using Ecuador as an example, demonstrates how tropical vegetation experienced increased greenness...

    Keywords: remote sensingTime Series AnalysisEarth ObservationEarth and Space SciencesgeographyGIMMS NDVIgreening and browningtropical Andes

    302

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    Plant-microbial mutualisms in canopy gap recovery: How do soil microbial symbionts help tropical forests recover from treefall gaps?
    This module uses tropical plant-soil microbial interactions in canopy gaps as a lens to better understand species interactions and disturbance ecology, while showing how scientists study these...

    Keywords: forest ecologyPlant Ecologynutrient cyclingmicrobestropical forestsDisturbances

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    Restoring Tropical Forests: Implementing an online module in an undergraduate biology course in Indonesia
    This resource describes my implementation of a module on tropical forest restoration in Costa Rica for an undergraduate Ecology course at Universitas Gadjah Mada, Indonesia....

    Keywords: RestorationEcosystem Servicesforest restorationtransdisciplinary researchsocial forestryhuman well-beingcommunity-based

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    Healing the scars: A tropical rainforest carbon cycling module implemented in a Forest Ecology course
    This publication describes my implementation of this module on tropical rainforest carbon cycling in an undergraduate forest ecology course for majors in the Department of Silviculture and Forest...

    Keywords: carbon cyclingnutrient cyclingenergy flowecosystem productivity

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    MCC - A National Malate Dehydrogenase Protein-Centric Molecular Life Sciences Couse-based Undergraduate Research Network (RCN-UBE Introduction)
    The MCC is an inclusive national community consisting of faculty, from community colleges, MSI, PUI and Research Intensive institutions teaching and developing Course based Undergraduate Research...

    Keywords: RCN-UBE Introduction

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    Environmental Pollution & Public Health (Project EDDIE) used in an introductory Environmental Challenges course
    Environmental health is a field of study within public health that is concerned with human-environment interactions, and specifically, how the environment influences public well-being. In this...

    Keywords: public healthProject EDDIEpollution

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    CBEC - Cell Biology Education Consortium (RCN-UBE Introduction)
    The CBEC helps faculty at PUIs move cancer cell culture research into the classroom. The mechanism that provides faculty with the resources they need to do this are modular protocols called Cell...

    Keywords: RCN-UBE Introduction

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    2015-Sebesyen-Farago-Invasive Species Model with Linear Rat Harvesting on Easter Island
    In this paper we suggest a natural modification of this model. Namely, we will investigate the case where the amount of the rats is decreased due to some external factor, e.g., exterminations by...

    Keywords: carrying capacityharvestEaster Islandinvasie especiesratsRoughgarden theorem.

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    2011-Teleken-EtAl-Mathematical modeling of microbial growth in milk
    A mathematical model to predict microbial growth in milk was developed and analyzed. The model consists of a system of two differential equations of first order. The equations are based on physical...

    Keywords: bacteriadairymilkfood safetymicrobilogy

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    2013-Brian_Winkel-Reflecting_On_Walls
    We reflect on our passion for teaching mathematics, useful mathematics, by considering our understandings of just what a wall is and what a wall means to us.

    Keywords: mathematicsmathematical modellearningcell wall

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    Prairie Eco Services (Project EDDIE)
    As densely populated urban areas continue to expand, human activity is removing much-needed greenspaces from our communities; in turn, we are also removing critical buffers that are needed to...

    Keywords: Project EDDIEWater cycle

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    NMDS to Study Dead Wood Fungi Communities in Parks of New Jersey
    Students use dead wood (saproxylic) fungi occurrence data from New Jersey, USA collected by students and faculty of Kean University to learn the basics of community ecology. Simple NMDS ordination...

    Keywords: RRStudioCommunity EcologyBioinformatics Educationbiodiversity informaticsNMDSfungiordination

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    Mosquito Invasion! A Lotka-Volterra Competition Case Study
    In this instructor-led interrupted case study, students practice interpreting Lotka-Volterra competition model parameters using data on an invasive and native mosquito species.
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    QUBES-ESA partnership uses online Faculty Mentoring Networks to prepare faculty for teaching quantitative biology to undergraduates
    Poster on Faculty Mentoring Networks presented at ESA 2018

    Keywords: faculty mentoring networksResources @ ESA - TIEE

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    Gene Expression in Stem Cells
    The module served as in introduction to the Gene Expression unit. It was implemented in two phases, a pre-class activity and an in-class activity to introduce chapter concepts and reinforce...

    Keywords: small group activitypre-class activityGeneral Biology

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    Biodiversity Show and Tell: An Accessible Activity to Encourage Students to Explore the Tree of Life
    An appreciation of organismal diversity is a requirement for understanding evolution and ecology, and can serve as a source of amazement and wonder that inspires students to enjoy biology. However,...

    Keywords: EvolutionecologyBiodiversity

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    Exploring Species Interactions with "Snapshot Serengeti"
    Authentic learning experiences are a valuable way for students to gain an in-depth understanding of the scientific process. However, implementing such experiences in large enrollment courses can be...

    Keywords: ecologyspecies interactionscitizen scienceCommunity Ecologyanimal behaviorScience Communicationmigrationanimal activityspecies distribution

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    The Developmental Origins of Mythology: A Pandemic-Inspired Innovative Developmental Biology Laboratory Exercise
    From an experiential, hands-on perspective, the Developmental Biology Laboratory is easily amenable to a wide range of undergraduate-friendly experiments. Thus, pivoting to a virtual laboratory...

    Keywords: gastrulationaxis formationlimb developmentchimeramidline

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    Active Learning: Developing Self-Directed Learners Through Strong Intellectual Engagement
    When they were students, many current science instructors learned through traditional lectures. This mode of passive knowledge transmission has been shown to be less effective for student learning...

    Keywords: active learningmetacognitionconstructivism

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