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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Genomics Lessons with GEA - RNA-Seq CURES
    Our BIOME Group worked towards developing a set of learning goals for faculty who plan to launch a CURE based on RNA-Seq data. We also developed a workflow for analysis of either prokaryotic or...
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    Pre-lesson: Introduction to BLAST
    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. This pre-lesson introduces the BLAST tool.

    Keywords: Bioinformatics EducationBioinformatics and Genomics

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    Undergraduate Research at Lane Community College
    Session presentation on CURES at Lane Community College presented at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: undergraduate researchcommunitySummer Workshop 2018CUREs

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    A Framework for Modeling to Encourage Interdisciplinary Conversations
    Presentation given as part of a minisymposium at SIAM 2016 on interdisciplinary approaches to modeling.

    Keywords: modelinginterdisciplinaryminisymposium

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    Introduction to Python for Data Science Course
    Free Introduction to Python for Data Science Course at DataCamp

    Keywords: data scienceonline learningcoursepythonfree

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    Introduction to R Course
    Free Introduction to R Course at DataCamp

    Keywords: Rdata scienceonline learningcoursefree

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    Math Bench Probability and Statistics: Basic Rules of Probability
    MathBench resource covering the "Law of Or" and the "Law of And" and how to use them in an online setting

    Keywords: ProbabilityResources @ MathBenchonlinerule of orrule of and

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    Online exercise: Managing Prairie Dogs for Ferret Reintroduction: A Case Study
    This data-driven ‘ferret reintroduction’ exercise, adapted from https://www.sesync.org/printpdf/2264, was developed for undergraduate students in an online non-majors biology course as a final...
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    Managing Prairie Dogs for Ferret Reintroduction: A Case Study in an online environment
    The case study Managing Prairie Dogs for Ferret Reintroduction was modified to be used in an online environment.
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    Expanding Undergraduate Participation in Computational Biology: Resources and Lessons Learned from a Hands-on Workshop
    Presentation on computational biology in undergraduate education at the 2019 Great Lakes Bioinformatics Conference

    Keywords: undergraduate educationcomputational biologybioinformatics

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    Pick Your Poison: A Semester-Long Case Study for Undergraduate Toxicology
    The ability to collate information from diverse scientific resources and effectively employ scientific writing is an essential skill for scientists. This lesson describes a semester-long project...

    Keywords: risk assessmenttoxicologyPharmacologyregulationsdose responseADME

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    Electron Location, Location, Location: Understanding Biological Interactions
    Introductory Biology courses typically introduce the structure and function of biomolecules such as proteins and nucleic acids. To understand biomolecules fully, students require knowledge of...

    Keywords: hydrogen bondshydrophobicity/hydrophilicitypolar and non-polar covalent bonds

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    Interactive Video Vignettes (IVVs) to Help Students Learn Genetics Concepts
    Many video resources exist to teach Mendelian genetics, but most consist of passive delivery of information rather than active construction of knowledge by users. We have created two interactive...

    Keywords: genotypephenotypeallelespedigreedominanceHardy-Weinberg equilibriumInheritance

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    A Modeling Exercise in Sexual Selection using a Student-Created Bird Species
    Evolution-centered lessons at the undergraduate level can often be jargon-heavy, propagate misconceptions if taught ineffectively, and be uninteresting to students who may not see the relevancy of...

    Keywords: Evolutionfitnesssexual selectionNatural Selectionintersexual selectionmate choice

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    Teaching Cancer Biology Through a Lens of Social Justice
    The biology classroom is not separate from the greater context of society; social issues can and should be presented in connection with the content. Here we present an example of antiracist...

    Keywords: assessmentcancersocial justicePOGILAlignmentPublic ExamPublic

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    (Online) Figure of the Week: Skills for Interpreting Comparative Genomics Figures
    Students use their number sense to make observations and explain or guess at patterns shown, discussing in a weekly online Q&A forum.

    Keywords: graphsonline learningmath anxietyonline forummath attitudesResources @ BIOMAAPInterpreting Graphsdiscussion forumComparative genomics

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    REMNet: Online Resources 5.3.19
    Video on online resources for studying microbiomes from the Research Experiences in Microbiomes Network

    Keywords: VideoMicrobiology EducationmicrobiomesMicrobiome researchresearch in the classroomREMNet

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    How to create "funny symbols" (aka math / statistical notation) in Microsoft Word / Office
    YouTube video on using statistical notation in Microsoft Word.

    Keywords: videosonline learninggenomicsyoutubestatistics symbols

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    Visual Datasets
    This downloadable module features imaginary animals and plants, and is meant to aid students in thinking about questions of evolution, classification, and phylogeny.

    Keywords: moduleEvolutionResources @ BioQUESTonlinephylogenyonline learning

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    2015 BEER Minisymposium: QUBES: Online community and resources for quantitative biology education
    Presentations included in a minisymposium at the Eighth International Symposium on BEER, Illinois State University, Normal, IL

    Keywords: QUBESminisymposium

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