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    GeoPhyl
    This Excel workbook allows students to explore evolution over space and time using published data on the invasive plant Tamarix (salt cedar).

    Keywords: Invasive SpeciesTamarixsalt cedarpermutation testrandom geographic distribution

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    Investigating Sexually Transmitted Disease (STD) Ecologies Using Geographic Information Systems (GIS) (Abstract) | TIEE
    Identifying, mapping and understanding the magnitude and the spatial prevalence of the Sexually Transmitted Diseases (STDs) such as chlamydia and gonorrhea diseases. Analyzing the spatial trends of...

    Keywords: Resources @ ESA - TIEEDisease ecologyfmnDIGhuman ecology and behaviorbacterial infectionsspatial and temporal spread of diseaseGeographic Information System (GIS)

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    Assessing the Risk of Invasive Species Using Community Science Data
    This module introduces students who are already familiar with GIS to doing comparative analyses with large-scale community science (often called citizen science) data sets. Students will explore...

    Keywords: Invasive SpeciesProject EDDIECitizen and Community Science

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    Mapping Specimen Occurrence Data in QGIS
    Use digitized natural history collection occurrence data from the Global Biodiversity Information Facility (GBIF) to map the distribution of the beaver in the state of Oregon from 1800-2020 using QGIS

    Keywords: natural history collectionsspecies distributionscourse-based research experiences (CUREs)digitized natural history collectionsQGIS

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    Phylogeography Simulator
    This Excel workbook simulates the phylogeography of an asexually reproducing species.

    Keywords: Phylogeographymutation ratesAsexual reproductionspecies dispersal

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    Sin Nombre Hantavirus in the US
    A module guiding students through the review of different biodiversity data sources to identify patterns in the distribution of the Sin Nombre Hantavirus in the United States. English, Spanish, and...

    Keywords: Resources @ AIM-UP!infectious diseasespublic healthnatural history collectionsWildlife Diseasedigitized natural history collectionsenglishSpanishzoonotic diseaseshantavirusMEPAPortuguesetranslated

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    2011-Yanyu_Xiao-Study of Malaria Transmission Dynamics by Mathematical Models
    The novelty lies in the fact that different distribution functions are used to describe the variance of individual latencies. The theoretical results of this project indicate that latencies reduce...

    Keywords: infectious diseaseinfectionmalarialatencyspatial dispersalmulti-species

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    Spatial Analysis with QGIS
    Map specimen data points using QGIS, connect them to form a polygon using the Concave Hull plugin, and calculate the range of a species to examine how it changes over time.

    Keywords: natural history collectionsspecies distributionscourse-based research experiences (CUREs)spatial analysisdigitized natural history collectionsQGIS

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    Distributions CURE- Exploring Species Distribution Changes and their Drivers
    This course-based undergraduate research experience (CURE) uses digitized natural history collections data to answer questions about species distributions and their drivers. This inclusive CURE can...

    Keywords: Evolutionecologyidigbiodata management#iNaturalistcourse based undergraduate research experienceshuman impactsspecies distributionscourse-based research experiences (CUREs)digitized natural history collectionsGBIFQGISBCEENETgeoreferencing

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    Infectious Chocolate Joy with a Side of Poissonian Statistics: An activity connecting life science students with subtle physics concepts
    Introductory physics courses are required for many programs in the life sciences, yet traditional curricula fail to help students meaningfully connect physical concepts with biological...

    Keywords: quantitative biologyHIVmultiplicity of infectionPoisson DistributionPhysics for biologists

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    6-008-PursuitModels-Modeling Scenario
    Students are prompted to build systems of nonlinear differential equations to model pursuit-evader activities in which a pursuer attempts to follow, perhaps track down and come close to, an evader...
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    Assessing Socioeconomic Trends in Tree Cover and Human Health in Urban Environments
    In this exercise, students use a combination of publicly available data and tree cover data that they generate using iTree Canopy to test whether tree cover is equitably distributed within the city...

    Keywords: social justiceSimple Linear Regressionenvironmental justiceGeographic Information System (GIS)Using ExcelConnection to PlaceredliningEcosystem Servicesurban tree coverurban environments

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    Island biogeography, spatial ecology, and macroinvertebrate species diversity in Richmond’s rock pools
    Students investigate questions of community ecology and biogeography using data from an urban rock pool ecosystem. Using ArcGIS 10, students learn to create effective maps, calculate landscape...

    Keywords: aquatic macroinvertebratesCommunity Ecologyspecies diversityGeographic Information System (GIS)spatial analysisJames River

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    Java array and random number generator, hints
    Java, UTC, Fall 2017

    Keywords: videosjavabioinformaticsgenomicsyoutuberandom number generator

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    Sampling Distributions and Null Distributions: two swirl lessons in R
    There are two complementary lessons. The first covers how sampling distributions are made and ID's their key properties. The second covers how null distributions and how the test statistic of a...

    Keywords: The Analysis of Biological Datateaching with technologySwirl

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    Painting turtles: an introduction to species distribution modeling in R
    This module uses R software to introduce students to the process of accessing databases and building species distribution models based on occurrence records.

    Keywords: RResources @ ESA - TIEEfmnDIGspecies distributionshabitat suitabilitycooperative learningjigsaw

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    Chapter 7: The normal distribution
    Biostatistics Using R: A Laboratory Manual was created with the goals of providing biological content to lab sessions by using authentic research data and introducing R programming language....

    Keywords: biostatisticsR programming language

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    Chapter 6: Population proportions and the binomial distribution
    Biostatistics Using R: A Laboratory Manual was created with the goals of providing biological content to lab sessions by using authentic research data and introducing R programming language....

    Keywords: biostatisticsR programming language

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    Introduction to Probability, Statistics, and Random Processes
    This site is the homepage of the textbook Introduction to Probability, Statistics, and Random Processes by Hossein Pishro-Nik.

    Keywords: textbookcurriculumcourseproblem setsolutions

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    Predicting and classifying effects of insertion and deletion mutations on protein coding regions
    Mutations in genes can affect the encoded proteins in multiple ways, and some of these effects are counterintuitive. As for any other knowledge, students must create their own deep understanding of...

    Keywords: mutationcentral dogmatranslationframeshift

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