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Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Access to Public Parks, Drinking Fountains, and Clean Public Drinking Water Across Income Brackets in the Bay Area
    Access to green space and clean drinking water can be unequally distributed in urban spaces, often associated with income inequality. Little is known about public drinking water and green space...

    Keywords: clean drinking water

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    Human Activity and Soil Hostility
    The composition of soil can be broken down to a mixture of both abiotic and biotic matter. This composition can include animal waste, minerals, water, and even air. The complex nature of soil...

    Keywords: soil science

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    The Effect of Different Fertilizer Treatments on the Sprouting Time and Growth of Cosmos seeds, seeds of the genus Myosotis Forget-Me-Not seeds, and Cruciferae Brassica nigra Mustard seeds
    During the past decade, climate change has become an important topic. A few ramifications include an excess amount of carbon dioxide and rising temperatures. It is predicted that ecosystems may...

    Keywords: agriculture

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    Instagram’s Impact on Self-Esteem of Local High Schoolers
    Social media’s effects on connecting people worldwide and its exponential growth in usage sparked studies on its effect on the mental state of users. In the local community of Saratoga,...

    Keywords: social mediamental health

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    Passion-Driven Statistics as a Course-Based Undergraduate Research Experience (CURE)
    Session presentation on passion-driven, project-based experience in statistics at the 2018 QUBES/BioQUEST Summer Workshop

    Keywords: statisticsproject based learningCURE

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    Genome Hunters: A Quantitative Biology Course-Based Undergraduate Research Experience (CURE)
    Poster outlining the process of designing, implementing, and assessing a new quantitative biology CURE course series. Presented at the 2021 BIOME Institute.

    Keywords: quantitative biologycourse-based undergraduate research experienceCURE2021 BIOME

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    A Comparison of the Water Quality Between Chinatown and Bayside: Two Demographically Different Regions in NYC
    Being Published in Journal of Emerging Investigators: In this research paper, we will be comparing the water quality in Chinatown –an area with a majority poor Asian population– and Bayside –a...

    Keywords: water quality and resource allocationNew York

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    Enabling authentic ecological inquiries using research data and imageries in large classrooms
    Presentation made by Ben Wu et al. as part of the "Bringing Research Data to the Ecology Classroom: Opportunities, Barriers, and Next Steps” Session at the Ecological Society of America annual...

    Keywords: Ecological Society of America

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    Using the IEDB to Predict Proteasomal Cleavage Events and T-cell Epitopes
    Research experiences provide a valuable view into the world of science and a great way to explore new fields and careers while developing critical thinking skills. The development and maintenance...

    Keywords: biologydatabaseImmunologydata sciencebioinformaticsBiotechnologyt-cellengineeringantibodyBioengineeringAntibody EngineeringlymphocytesProteinNetChopepitopeIEDBB-cellProteasomeProteasomal Cleavage

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    Learning Journal Assignment and Instructor Guide on Citizen Science
    Citizen science is a term which gain attention in 1990s which involved research conducted with participation between public and scientist. Citizen Science approach has diversified into multi and...

    Keywords: stemcitizen sciencefaculty developmentscienceFaculty

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    BIO 439/539: Big Data Analysis
    Course materials for BIO 439/539: Big Data Analysis

    Keywords: Rdata analysisbig datadata managementstatistical methods

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    Data Analysis for the Life Sciences
    An online stats book written completely in R

    Keywords: Rbiostatisticsstatistical analysisR Markdown

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    Panel: Implementing and distributing learning resources in quantitative biology education
    A panel portion of the session focusing on how individuals would implement the QUBES Hub during their own professional development.

    Keywords: QUBESquantitative biology

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    Ecological Forecasting Repository of Online Educational Resources
    This pdf provides a list of over 100 educational resources related to tools and skills related to ecological forecasting.

    Keywords: statisticsvideosecologymodel buildingmodulespythonecological forecastingonline course materialcode repositoriesonline textbooksbasics of Rdata sourcesdata skillsforecast cycleapplying forecastsdecision science

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    SKILLS DEVELOPMENT - Toxicology MSDT
    On this website you can find 6 learning modules on various topics in toxicology. These are self-paced student-centered online learning modules. You will receive a certificate of completion at the...

    Keywords: pathophysiologyregulatory toxicologyprinciples of toxicologybiochemistry and molecular geneticsprinciples of genetic toxicologyapplied systems toxicology

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    Genome Solver: Complete Set of Lessons
    The Genome Solver Project began as a way to teach faculty some basic skills in bioinformatics - no coding or scripting. These Lessons also work well in the undergraduate classroom, culminating...

    Keywords: bioinformaticsNIBLSEBioinformatics EducationBioinformatics and GenomicsC4. Bioinformatics toolsC5. Data retrievalC6. ModelsC8. Data typesC9. ImplicationsRecommended by NIBLSE

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    Helping teachers and students learn with research data: The role of a scientific gateway for education
    Presentation at the Cary Institute, April 5, 2018

    Keywords: QUBESteaching with data.data literacyPresentation

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    Data is the New Science - Modified and combined with Following the Data Module
    In this module, students will be introduced to some emerging biodiversity data resources. They will be asked to think critically about the strengths and utility of these data resources and apply...

    Keywords: data in the classroombiodiversity informaticsnatural history collection

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    Cell Collective: Learning biology with modeling and simulations
    Cell Collective is an online, research-grade modeling platform adapted to engage students in creating and simulating dynamic models of biological processes.

    Keywords: modelingsimulationSimulationsCell Collective

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    Exploring the Application of Genetic Concepts to the Process of Disease in a Pathophysiology Course for Undergraduate Nursing Students
    Poster on incorporating genetics concepts related to human disease into nursing courses presented at the 2019 BioQUEST & QUBES Summer Workshop
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