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    Creating Phylogenetic Trees from DNA Sequences
    This interactive module shows how DNA sequences can be used to infer evolutionary relationships among organisms and represent them as phylogenetic trees.

    Keywords: EvolutionHHMI BioInteractivephylogenetic tree

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    List of resources and support communities dedicated to biology undergraduate education
    Ecologists new to teaching and evidence-based teaching practices often feel alone and without support. There are resources and communities that can help them become better instructors and...

    Keywords: teaching resource

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    Mechanisms of Cell Attachment
    This module introduces the calculation of refractive indices along a cell surface in the context of understanding the attachment of cells to surfaces. It is intended for an introductory biology...

    Keywords: GeometryCell StructureCell GrowthSimple EquationsInterpreting GraphCell Attachment

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    Evolutionary Ecophysiology swirl lesson
    Uses swirl to walk students through how to use R and analyze their own data.
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    How Luxury and Legacy Effects Shape Urban Avifauna in Los Angeles, California
    Is L.A.’s bird population shaped by historic redlining and income inequality? This lesson will introduce luxury and legacy effects hypotheses as they relate to urban avifauna in LA neighborhoods....

    Keywords: ANCOVASimple Linear Regressionurban ecologyredliningavian ecology

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    2016-Helena_Sofia_Rodrigues-Application of SIR epidemiological model new trends
    In this paper, the basic transmission model is analyzed, as well as simple tools that allows us to extract a great deal of information about possible solutions. A set of applications - traditional...

    Keywords: epidemiologybasic reproduction numberSIR

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    2013-Herald-EtAl-Simple Climate Models to Illustrate How Bifurcations Can Alter Equilibria and Stability
    While college level science classes now frequently include exposure to climate change issues, not all science majors, math majors and future math K-12 teachers are likely to see climate issues in...

    Keywords: climate changeice capstipping pointbifuircation

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    2010-Shaza_Hussein-Predator-Prey Modeling
    The objective of this project was to create five projections of animal populations based on a simple predator-prey model and explore the trends visible.

    Keywords: population dynamicspredator-preylogistic equationEndangered Catsdecreasing populationrabbitsfoxes

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    2006-Salem-Abudiab-Labview-An Interactive Teaching Tool for a Differential Equations Class
    It is evident that computer based learning has become an essential part of education systems. It provides animation and interactive processes that are not possible with textbooks.

    Keywords: javavisualizationvirtual labpendulumLabviecomputer assisted instructionharmonic motion

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    2004-Aldo_Rescigno-On the use of pharmacokinetic models
    In this paper I will define in a simple and logical way a set of useful pharmacokinetic parameters and show how their estimation depends on the assumed model.

    Keywords: compartmentsteady statepharmacokineticsvolume distribution

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    2004-Mark_McCartney-Using_second-order_ordinary_differential_equations_to_model_traffic_flow
    A simple mathematical model for how vehicles follow each other along a stretch of road is presented. The resulting linear second-order differential equation with constant coefficients is...

    Keywords: differential equationstraffic flowvehicle followsecond order

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    3-099-PullBack-ModelingScenario
    We guide students through the development of an empirical model for the velocity and distance traveled of a simple pull-back toy. Students can record videos and extract data using their own...

    Keywords: dynamicspull-back toy

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    Inquiry-based hypothesis testing using phylogenetic trees in MEGA
    A key learning objective in biology is applying bioinformatics tools to test a real-life question. These inquiry-based modules have students assemble and align data, and construct simple...

    Keywords: phylogeneticsbioinformaticsFASTANCBIBLASTmultiple sequence alignmentsequence similarityCourseSourceZika virusMEGAalcohol metabolism

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    Exploring global reef health and human population using correlation and simple linear regression
    In this lesson, students will explore the relationship between reef cover and human disturbance. Students will manipulate a large dataset and perform normality tests, data transformations,...

    Keywords: population dynamicshumanlinear regressionconservationcorrelationRestorationcoral reefs

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    ModelSim Population Biology Unit
    This resource provides rich student modeling activities and materials, teacher resources, and much more, in the realm of agent based models applied to population biology.

    Keywords: modelingsimulationmoduleEvolutioncase studycurriculumagent-based modelpopulation modeldemonstrationin-class activityPresentation

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    Food Chain Dynamics In A Simple Ecosystem
    In this lab, students will work with a simple algae/brine shrimp environment to learn about food chains and population dynamics. It was implemented with limited alteration for an Introductory...

    Keywords: ecologyecosystemsfood chain

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    Exploring Health Inequities and Redlining
    For this assignment, students will investigate relationships between historic redlining data and modern statistics of human health.

    Keywords: diseasehealthsocial justicepublic healthData science for Biologistredliningchronic diseasesocial vulnerability

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    2016-Barbarossa-Kuttler-Mathematical Modeling of Bacteria Communication in Continuous Cultures
    This paper presents a simple system of delay differential equations (DDEs) for quorum sensing of Pseudomonas putida with one positive feedback plus one (delayed) negative feedback mechanism.

    Keywords: gene regulatory networkschemostatbifurcationNumerical Simulationquorum sensing

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    2009-Noakes-Sleigh-Mathematical models for assessing the role of airflow on the risk of airborne infection in hospital wards
    Understanding the risk of airborne transmission can provide important information for designing safe healthcare environments with an appropriate level of environmental control for mitigating risks.

    Keywords: infectioncompartmenthospitalventilationairbornesthochasticWells–Riley

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    1989-R_Blickhan-Spring Mass Model For Running-Hopping
    A simple spring—mass model consisting of a massless spring attached to a point mass describes the interdependency of mechanical parameters characterizing running and hopping of humans as a function...

    Keywords: spring massjumpjumping

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