You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    2000-Erdman-Morelock-A Study of Kinetics The Estimation and Simulation of Systems of First-Order Differential Equations
    This paper introduces new and old features of the SAS System for the estimation and simulation of systems of first-order differential equations with emphasis on examples in kinetics.

    Keywords: kineticsSAScompartmentpharmacokinetics

    332

    views

    35

    downloads

    0

    comments

    0

    adaptations

    1-002-Tossing-ModelingScenario
    We offer students simulation experience or data from a simulation and ask them to model the simulation using several approaches, to include exponential decay fit, difference equation, and...

    Keywords: Modeling and simulationexponentialdecaydice

    203

    views

    183

    downloads

    0

    comments

    0

    adaptations

    Promoting Climate Change Literacy for Non-majors: Implementation of an atmospheric carbon dioxide modeling activity as an inquiry-based classroom activity
    Students who are directly involved in scientific activities develop a deeper understanding and appreciation of both scientific knowledge and the scientific process. This understanding is critically...

    Keywords: modelingExcelquantitativeclimate changeEnvironmental Biologyatmospheric carbon dioxide

    1393

    views

    283

    downloads

    0

    comments

    0

    adaptations

    Nucleoplasmic Index
    This module introduces the nucleoplasmic index in the context of understanding how the volume of organelles and cell contents change during the cell cycle. It is intended for an introductory...

    Keywords: RatiosInterpreting GraphsCell StructureCell GrowthNucleoplasmic Index

    1659

    views

    274

    downloads

    0

    comments

    0

    adaptations

    Closing the Gap in the Open Educational Resources (OER) Life Cycle for Using Research Data in the Ecology Classroom
    Poster presented at the 2018 meeting of the Ecological Society of America on gaps in the curriculum cycle for open educational resources (OER) and our work supporting sharing and adaptation of...

    Keywords: OEREcological Society of AmericaDIGoer life cycle

    2585

    views

    390

    downloads

    0

    comments

    0

    adaptations

    Doubling Time of Tumors
    This module introduces the calculation of potential doubling time of tumorous cells in the context of understanding the growth of a population of the cells. It is intended for an introductory...

    Keywords: linear regressionRatiosCell StructureOpenStaxCell Growth

    937

    views

    172

    downloads

    0

    comments

    0

    adaptations

    Integrating Community Ecology Into the Study of Parasites: Exploring the Effect of Host Behavior on Parasite Transmission Rates
    Organismal life cycles are often presented as a set of facts to memorize in undergraduate biology courses. This approach is cognitively demanding for students and fails to convey how central life...

    Keywords: statisticsspecies interactionsQuantitative reasoninggraphsCommunity EcologyParasitologyfood webs

    2547

    views

    208

    downloads

    0

    comments

    0

    adaptations

    Web Popgen
    A Hardy-Weinberg simulation program.

    Keywords: Hardy-Weinbergpopulation geneticscomputer simulationsGenetic DriftmutationNatural Selection

    1947

    views

    319

    downloads

    0

    comments

    0

    adaptations

    Michaelis-Menten Enzyme Kinetics
    In this simulation, equations used in enzyme kinetics (Michaelis-Menten, Eadie-Hofstee, Dixon, and Lineweaver-Burk) are modeled under various conditions.

    Keywords: ExcelResources @ ESTEEMMichaelis-Mentenenzymesenzyme kinetics

    1508

    views

    336

    downloads

    0

    comments

    0

    adaptations

    Populus: Simulations of Population Biology
    Link to Populus Software

    Keywords: simulationpopulation growthpopulus

    2097

    views

    319

    downloads

    0

    comments

    0

    adaptations

    1-101-ClassMMDeathImmigration-ModelingScenario
    We offer students an opportunity to generate unique data for their team on a death and immigration model using m&m's and then pass on the data to another student team for analysis with a model they...

    Keywords: simulationimmigrationdata collectiondeath

    262

    views

    207

    downloads

    0

    comments

    0

    adaptations

    3-076-CircuitBuilding-ModelingScenario
    In this project students will establish a mathematical model for an electric circuit as a second-order ordinary differential equation with constant coefficients.

    Keywords: simulationexperimentMultisimcircuitinductancecapacitorKirchhoff's Voltage Lawresistor

    200

    views

    405

    downloads

    0

    comments

    0

    adaptations

    1-062-BacteriaGrowth-ModelingScenario
    We offer students a simulation experience or data from a simulation and ask them to model the simulation using several approaches: exponential growth fit, difference equation, differential...

    Keywords: bacteriaexponentialgrowth

    211

    views

    272

    downloads

    0

    comments

    0

    adaptations

    Cell Collective: Learning biology with modeling and simulations
    Cell Collective is an online, research-grade modeling platform adapted to engage students in creating and simulating dynamic models of biological processes.

    Keywords: modelingsimulationSimulationsCell Collective

    1014

    views

    654

    downloads

    0

    comments

    0

    adaptations

    1-084-GoingViral-ModelingScenario
    Students employ randomization in order to create a simulation of the spread of a viral disease in a population (the classroom). Students then use qualitative analysis of the expected behavior of...

    Keywords: simulationlogisticrandomfittingpartial fractions

    222

    views

    98

    downloads

    0

    comments

    0

    adaptations

    Data Analysis and Cancer
    This is a flipped classroom approach, students will learn the basic content about cell-signaling, p53, and transcription factors before class. During class students will focus on data analysis...

    Keywords: Resources @ HHMI - BioInteractiveBiochemistrymolecular biologydata interpretationBiological Data Analysiscell cyclemacromoleculesGenetic diseaseCell signaling

    1636

    views

    3744

    downloads

    0

    comments

    0

    adaptations

    Coordinating Photosynthetic Activity: Circadian Rhythms
    This module introduces circadian rhythms in the context of understanding the ability of organisms to measure time. It is intended for an introductory biology audience.

    Keywords: plant physiologyTrigonometrysine waves

    951

    views

    176

    downloads

    0

    comments

    0

    adaptations

    CYTOSKELETON - Microtubule Dynamics in the Cell Cycle
    This module contains exercises designed to help upper-level cell biology students understand the dynamics of microtubule polymerization and depolymerization within the cell cycle and how cancer...

    Keywords: cell biologyQuantitative reasoningInterdisciplinary STEMInterpreting GraphsCytoskeletonScientific reasoningdimensional analysisNIQBC2. Data and GraphsC6. Quantitative LanguageC1. Numeracy

    421

    views

    425

    downloads

    0

    comments

    0

    adaptations

    Serenity now! Keep calm and do science with real data in the classroom
    Presentation on a free web application currently under development on QUBES called Serenity at the 5th Life Discovery Conference

    Keywords: data sciencetool:serenity5th Life Discovery- Doing Science Education conference (LDC)5th Life Discovery Conference

    1259

    views

    53

    downloads

    0

    comments

    0

    adaptations

    Cell Division and Rates of Population Growth
    This module introduces the exponential growth of cells in the context of understanding cell division. It is intended for an introductory biology audience.

    Keywords: exponential equationscell growth and divisionGeometric SeriesCell StructureOpenStaxgeometric equations

    1077

    views

    194

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search