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    Towards better modelling and decision support: Documenting model development, testing, and analysis using TRACE
    We introduce TRACE, a framework for documenting model testing and analysis. TRACE is based on the recently proposed framework of model "evaluation" , and is designed to make models fit for...

    Keywords: standardizationgood modelling practicerisk assessmentdecision supportTRACEResources @ QUBES - Teaching & Reference

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    Exploring the population dynamics of wintering bald eagles through long-term data
    Exploring long-term population data through graphical and statistical means Practice module included in Teaching Issues and Experiments in Ecology (TIEE) Volume 7

    Keywords: Resources @ ESA - TIEEcase studypopulation ecologyendangered speciesconservation biologymigration ecology

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    Biomes lecture with active learning activities and a worksheet set
    Learning Objectives: *Identify the characteristics of each biome *Know the major drivers of global climate patterns *Discern how 2 factors largely determine terrestrial biomes *Evaluate the...

    Keywords: lecture slidesgraphsglobal warmingclimatebiomesConvergent Evolution

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    Supplemental Materials for Beagle Investigations Return with Darwinian Data Manuscript
    Supplement 1 contains an example laboratory exercise for introducing the BIRDD resources. Supplement 2 contains a list of web accessible data resources to supplement the existing BIRDD resources.

    Keywords: Galapagosdata on darwins finches

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    Frayer model growth mindset
    A Frayer model worksheet for the concept of growth mindset.

    Keywords: growth mindsetFrayer model

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    Yeast Cell Growth
    Numbers Count resource using Excel for data analysis

    Keywords: data analysisExcelNumbers Count

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    EDSIN Conference Flier
    This is the official conference flier. Feel free to distribute via your networks.

    Keywords: environmental scienceconference flierEDSINNSF INCLUDES

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    Vaccine Development and Testing
    Scientists have the tools and knowledge to develop safe, effective vaccines, from trials to vials. This resource addresses the process by which vaccines are designed, tested and regulated. Key...

    Keywords: immunology educationvaccine literacyvaccine hesitancy

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    2011-Brian_Winkel-Parameter_Estimates_in_Differential_Equation_Models_for_Chemical_Kinetics
    We estimate the parameters present in several differential equation models of chemical kinetics and logistic growth.

    Keywords: kineticsparameter estimationlogisticchemical kineticschemical reaction

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    2015-Brian_Winkel-Informed_Conjecturing_of_Solutions_for_Differential_Equations_In_a_Modeling_Contex
    We examine (1) first order exponential growth or decay and (2) second order, linear, constant coefficient differential equations, and show the advantage of learning differential equations in a...

    Keywords: exponential growthsolutionslinear systemsdecayconjecture

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    7-040-TankInterruptMixing-ModelingScenario
    We present a first order differential equation model for the interrupted mixing of a tank with salt water. We offer two solution strategies (1) two step approach and (2) Laplace Transforms.

    Keywords: Laplace transforminverse Laplace Transformsalttankmixinginterrupt

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    Impact of Warming on Tidal Wetlands
    This lesson uses a t-test and ANOVA to determine if higher temperatures will have a significant impact on change in mangrove height, change in belowground biomass, and change in surface elevation...

    Keywords: climate changesea-level risesalt marshTidal WetlandElevation ChangeMangrove Forest

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    Reflective Writing - 2-page handout & Teaching Notes
    This activity introduces the research showing a benefit of reflective writing, and then uses a modified version of the prompt from Park et al. to provide practice. Includes Teaching Notes.

    Keywords: writingreflective writingmath attitudesResources @ BIOMAAP

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    Discrete Math Modeling with Biological Applications (Course Materials)
    These are the materials for Math 214 offered at Rhodes College.

    Keywords: labsDiscrete Difference Equationsmatrix modelscoursebiomath coursedemonstrationin-class activitylab protocolproblem set

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    Cancer Discovery Activities
    These two hands-on activities are based on a Howard Hughes Medical Institute 2013 Holiday Lectures on Science video (http://www.hhmi.org/biointeractive/cancer-genetic-disease-video-highlights)...

    Keywords: geneticsResources @ HHMI - BioInteractiveorganismal biologyneurosciencegenomicscancergenetic basis of diseasebiology of cellsHigh School

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    COVID-19: Molecular Basis Infection Revisited One Year into the Pandemic
    This adaptation was written in Spring 2021 exactly one year after the original case and includes explorations of the emerging mutations within the spike protein

    Keywords: infectionvaccinemolecular visualization and analysisCOVID19PDBSARS-CoVMolecular Case Studyvariantsantibody

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    Escape Zoom!: Reviewing Introductory Evolution Content Using an Escape Room Format
    Reviewing and integrating key concepts and learning goals at the end of a biology course can be overwhelming to students and instructors alike. Often end-of-term review sessions in preparation for...

    Keywords: Evolutionartificial selectionSpeciationextinctionsexual selectionphylogenetic treesmechanisms of evolution

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    Using Open-Source Bioinformatics and Visualization Tools to Explore the Structure and Function of SARS-CoV-2 Spike Protein
    The relationship between protein structure and function is a foundational concept in undergraduate biochemistry. We find this theme is best presented with assignments that encourage exploration and...

    Keywords: bioinformaticsmolecular modelingCOVID19protein structure and functionUCSF ChimeraSARS-CoV-2 spike proteinACE2 receptor

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    3-100-Ripcord-Toys-ModelingScenario
    This modeling scenario examines the motion of a ripcord-powered toy with the goal of using real data to estimate parameters in a first-order model of the velocity of the toy. Students may conduct...

    Keywords: dataphysicsdynamicsdata collectionrollingslippingripcordtoy

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    2010-Brian_Winkel-Parameter estimates in differential equation models for chemical kinetics
    We discuss the need for devoting time in differential equations courses to modelling and the completion of the modelling process with efforts to estimate the parameters in the models using data.

    Keywords: kineticschemical kineticszeroth order reactionfirst order reactionsecond order reaction

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