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The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

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    Using Linear Regression Adaptation: Exploring Vector-borne diseases in an online classroom
    In this adaptation students in online classrooms will use linear regression at home and in synchronous online time to analyze real data on vector-borne diseases and explore how environmental...

    Keywords: ecologygraphingmicrobiologyqbccUnderstanding ratesCreate graphsInterpret graphsinterpret tablesConcepts in Statistics

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    Scientist Spotlights and Data Nuggets Workshop Materials (BIOME 2021)
    Materials and resources for the "Scientist Spotlights and Data Nuggets Workshop," presented at the 2021 Biology and Mathematics Educators (BIOME) Institute.

    Keywords: data literacyDiversity in STEM classroomsonline professional development

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    The Legacy of Redlining in Oakland, CA
    The issues of redlining and environmental justice will be introduced and used as a framework for a number of topics in the third part of the semester in a non-majors Environmental Science course.

    Keywords: environmental scienceenvironmental justiceredliningenvironmental racism

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    Quantifying The Drivers and Impacts of Natural Disturbance Events – The 2013 Colorado Floods
    This lesson focuses on ways that scientists identify and use data to understand ecological disturbance events using data from five public datasets. The main lesson focused on interpretation of...

    Keywords: data in the classroomdata interpretationprecipitationstream dischargePalmer Drought Severity IndexlidarEcological Disturbancedisturbance ecologyHigh School

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    Calling Bullshit Bates College DCS 105 RByte Slides
    This slide deck is a mix of in-class participation and coding activities which aims to formalize understanding of code.

    Keywords: RIntroductorybatescolabDCS 105Calling Bullshit

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    Graphing Techniques for Introductory Microbiology
    This module will introduce the introductory microbiology students to graphing skills to visualize and interpret the data to investigate the effect of environmental factor (temperature) on bacterial...

    Keywords: data analysisgraphinggraph interpretationdata interpretationmicrobiologySTEM educationtemperaturegroup workBEDENet FMNbacterial growth

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    bioBUDS: How to Read a Paper
    Undergraduates are often expected to read scientific papers for class and submit assignments based on their understanding of the contents of these papers. Most courses, in our experience as...

    Keywords: Reading Scientific PapersInterpreting Figures

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    Got Milk? Biome 2021 Lightning Talk
    The Got Milk? working group plans to use lactase persistence evolution as a case study to teach genetics in large introductory biology courses. While developing these resources, we will be mindful...

    Keywords: geneticsintroductory biologyundergraduate researchundergraduate educationStudent misconceptionsbiasdiversitylactase persistenceraceBIOME 2021

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    Re-Envisioning Culture Network: A Syllabus Guide
    The Re-Envisioning Culture Network Syllabus aims to honor Black identity and culture while acknowledging the barriers that Black undergraduate students face through definitions, art, storytelling,...

    Keywords: stemraceAddressing anti-blacknessBlack in STEM

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    Using Natural History Collection Data in Your CURE: BLUE BIOME 2020
    This is the report for the BLUE working group from the Biome Institute 2020. It reflects our group's efforts and products related to CUREs and Natural History Collection Digital Data.

    Keywords: digitized natural history collectionsBIOME 2020Biodiversity Literacy in Undergraduate Education

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    Adapting InTeGrate Materials for Online Courses
    As part of my second mentoring of the InTeGrate FMN for QUBES, I chose to focus on my conversion of several resources to an online course format.
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    Coral Bleaching Mapping Activity
    This is a classroom activity in which students use authentic data to assess the threat of coral bleaching around the world. It supports the 2014 Holiday Lectures on Science video featuring Dr....

    Keywords: ecologyResources @ HHMI - BioInteractiveBiodiversityclimateScientific ProcessStatistics and Mathecosystemsearth and environmenthuman impactsHigh School

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    Data is the New Science - Modified and combined with Following the Data Module
    In this module, students will be introduced to some emerging biodiversity data resources. They will be asked to think critically about the strengths and utility of these data resources and apply...

    Keywords: data in the classroombiodiversity informaticsnatural history collection

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    Understanding Fish Habitat Selection Using Snorkel Surveys
    Identifying the habitat selection patterns of aquatic species is necessary for protecting threatened and endangered native fishes, as well as for producing satisfying and exciting sport fisheries....

    Keywords: fishfisheriesstreamshabitatRiver Field Studies NetworkResource Selection

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    STEM as Culture: Exploring exclusion and inclusion in mathematics and biology
    This is a paper given as a plenary lecture at the second CalcConf in Bergen, Norway, June 2023. The paper explores how marginalization in society & living between worlds becomes a superpower in...

    Keywords: calculusbiocalculusrule of fivemarine biologyco2Microagressionsmauna keamauna loafeministtestimonioindigenous epistomologyanzalduagutierrezdisciplinary microaggressions

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    Shroomology 1010: Introduction to the Fascinating World of Fungi Lesson Plan
    A lecture will be hosted by the educator. The first four sections cover factual information and in the activity students will draw conclusions about spore germination. The last section will...

    Keywords: introductory biologyLecturein-class activitymycologythink-pair-share

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    Open Practices Learning Community Curriculum
    This is a learning community curriculum designed to engage participants in discussions, short readings and mini-exercises to explore basic tools for Open Educational Practices (OEP)

    Keywords: s-jediopen licensing

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    Lizard cold tolerance and extreme weather events: a scientist spotlight featuring Dr. Shane Campbell-Staton
    Students interpret experimental and observational data about patterns in cold tolerance in the green anole. They reflect on the experience and identity of the lead researcher based on a video...

    Keywords: climate changeNatural Selectionenvironmental variationphenotypic plasticityacclimationenvironmental conditions

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    STEM Inclusive Teaching Practices Episode 4
    Beyond Techniques: A Phenomenological Approach to Inclusive Teaching with Dr. Mays Imad.

    Keywords: teaching strategiesinclusionInclusive teachingphenoPhenomenological

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    Figure of the Week: Applied Statistics for Wildlife Research
    Students use their number sense to make observations and explain or guess at patterns shown, discussing at the start of a weekly computer lab. This slide deck focuses on figures related to concepts...

    Keywords: statisticsgraphsmath anxietyWildlife Biologymath attitudesInterpreting Graphssense of belongingfear of negative evaluation

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