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  1. 50 years of Data Science

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    23 Feb 2016 | Teaching & Reference Material | Contributor(s): David Donoho

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/912More than 50 years ago, John Tukey called for a reformation of academic statistics. In ‘The Future of Data Analysis’, he pointed to the existence of an as-yet...

  2. Course materials for computational genomics using R

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    19 Nov 2015 | Teaching & Reference Material | Contributor(s): Hong Qin

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/907The R code and data are deposited at Github: https://github.com/hongqin/RCompBio 

  3. Modernizing Statistics Education via Biology Applications

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    21 Oct 2015 | Teaching & Reference Material | Contributor(s): Olcay Akman

    This resource has been updated - find the current version here: https://qubeshub.org/publications/254In most traditional statistics courses, instructors use data from different fields in an effort to give the courses an interdisciplinary flavor. They generally fail because these attempts...

  4. Sting, Carry and Stock: How Corpse Availability Can Regulate De-Centralized Task Allocation in a Ponerine Ant Colony

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    20 Oct 2015 | Teaching & Reference Material | Contributor(s): Istvan Karsai, Thomas Schmickl

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/844We develop a model to produce plausible patterns of task partitioning in the ponerine ant Ectatomma ruidum based on the availability of living prey and prey corpses. The...

  5. SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations

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    20 Oct 2015 | Teaching & Reference Material | Contributor(s): Brian Winkel

    SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations  is about teaching differential equations using modeling and technology upfront and throughout the learning process. You can learn more at our dynamic website, www.simiode.org, where we...

  6. Data Analysis for the Life Sciences

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    25 Sep 2015 | Teaching & Reference Material | Contributor(s): Rafael A Irizarry, Michael I Love

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/841An online stats book written completely in R!From the authors:"Data analysis is now part of practically every research project in the life sciences. In this...

  7. Performing a Population Viability Analysis from Data Students Collect on a Local Plant

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    23 Sep 2015 | Teaching & Reference Material | Contributor(s): Noah Chamey, Sydne Record

    This resource has been updated - find the current version here: https://qubeshub.org/publications/264During two lab periods, students collect demographic data on perennial plants and then use these data in a matrix model to perform population viability analyses. During the first lab,...

  8. HHMI Teacher Guide: Math and Statistics

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    23 Sep 2015 | Teaching & Reference Material | Contributor(s): Paul Strode, Ann Brokaw

    This resource has been updated - find the current version here: https://qubeshub.org/publications/342Topics include measures of average (mean, median, and mode), variability (range and standard deviation), uncertainty (standard error and 95% confidence interval), Chi-square analysis, student...

  9. R Commander

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    04 Sep 2015 | Software (On-site) | Contributor(s): Drew LaMar

    R provides a powerful and comprehensive system for analysing data and when used in conjunction with the R-commander (a graphical user interface, commonly known as Rcmdr) it also provides one that is easy and intuitive to use.

  10. R Commander

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    04 Sep 2015 | Software (On-site) | Contributor(s): Drew LaMar

    R provides a powerful and comprehensive system for analysing data and when used in conjunction with the R-commander (a graphical user interface, commonly known as Rcmdr) it also provides one that is easy and intuitive to use.

  11. R Reference Card

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    02 Sep 2015 | Teaching & Reference Material | Contributor(s): Tom Short

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/840by Tom Short, EPRI PEAC, tshort@epri-peac.com 2004-11-07Granted to the public domain. See www.Rpad.org for the source and latest version. Includes material from R...

  12. R Shiny Basics

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    17 Aug 2015 | Teaching & Reference Material | Contributor(s): Claire K. Lunch, Christine M. Laney

    A nice introduction to building apps with R Shiny. Written by the folks at NEON (National Ecological Observatory Network).

  13. Rstudio cheatsheets

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    17 Aug 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/839Cheatsheets are quickstart guides to using some of the most popular packages and features of Rstudio. This link will direct you to the following cheatsheets:Shiny...

  14. Dairy Farm Mathematics

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    09 Jul 2015 | Teaching & Reference Material | Contributor(s): Richard Francisco, Katie Gilbert

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/783From the website:We based our instructional unit on the premise that many people have, that one does not need mathematics if the they do not plan on attending...

  15. Disease Spread Simulation with M&M's and Information on the wider SIMIODE community

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    03 Jul 2015 | Teaching & Reference Material | Contributor(s): Brian Winkel

    This resource has been updated - find the current version here: https://qubeshub.org/publications/358This is a Student Version of a Modeling Scenario from the community, SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations at...

  16. BactVsPhage

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    27 Jun 2015 | Software (On-site) | Contributor(s): Drew LaMar

    Simulates basic models in theoretical ecology, as well as three models of bacteria/bacteriophage interactions.

  17. A Quick Guide to Teaching R Programming to Computational Biology Students

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    03 Jun 2015 | Teaching & Reference Material | Contributor(s): Stephen Eglen

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/838An introduction from an experienced educator in teaching R to computational biology graduate students. Contains information that is relevant for the undergraduate classroom...

  18. BioRadiant

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    19 May 2015 | Software (On-site) | Contributor(s): Drew LaMar

    Interactive statistics package using R and Shiny.

  19. BioRadiant

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    19 May 2015 | Software (On-site) | Contributor(s): Drew LaMar

    Interactive statistics package using R and Shiny.

  20. Statistical Power for One-Sample t-Test

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    18 May 2015 | Software (On-site) | Contributor(s): Drew LaMar

    Interactive visualization of statistical power for a one-sample t-test.

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