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Data Analysis for the Life Sciences
25 Sep 2015 | Teaching & Reference Material | Contributor(s): Rafael A Irizarry, Michael I Love
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/841An online stats book written completely in R!From the authors:"Data analysis is now part of practically every research project in the life sciences. In this...
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Data Analysis for the Life Sciences
25 Sep 2015 | Teaching & Reference Material | Contributor(s): Rafael A Irizarry, Michael I Love
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/841An online stats book written completely in R!From the authors:"Data analysis is now part of practically every research project in the life sciences. In this...
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The Analysis of Biological Data: textbook and website
23 Sep 2015 | Teaching & Reference Material | Contributor(s): Michael Whitlock, Dolph Schluter
The Analysis of Biological Data is a new approach to teaching introductory statistics to biology students. To reach this unique audience, Whitlock and Schluter motivate learning with interesting biological and medical examples; they emphasize intuitive understanding; and they focus on real data....
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Performing a Population Viability Analysis from Data Students Collect on a Local Plant
23 Sep 2015 | Teaching & Reference Material | Contributor(s): Noah Chamey, Sydne Record
This resource has been updated - find the current version here: https://qubeshub.org/publications/264During two lab periods, students collect demographic data on perennial plants and then use these data in a matrix model to perform population viability analyses. During the first lab,...
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HHMI Teacher Guide: Math and Statistics
23 Sep 2015 | Teaching & Reference Material | Contributor(s): Paul Strode, Ann Brokaw
This resource has been updated - find the current version here: https://qubeshub.org/publications/342Topics include measures of average (mean, median, and mode), variability (range and standard deviation), uncertainty (standard error and 95% confidence interval), Chi-square analysis, student...
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HHMI Teacher Guide: Math and Statistics
23 Sep 2015 | Teaching & Reference Material | Contributor(s): Paul Strode, Ann Brokaw
This resource has been updated - find the current version here: https://qubeshub.org/publications/342Topics include measures of average (mean, median, and mode), variability (range and standard deviation), uncertainty (standard error and 95% confidence interval), Chi-square analysis, student...
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R Commander
04 Sep 2015 | Software (On-site) | Contributor(s): Drew LaMar
R provides a powerful and comprehensive system for analysing data and when used in conjunction with the R-commander (a graphical user interface, commonly known as Rcmdr) it also provides one that is easy and intuitive to use.
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R Commander
04 Sep 2015 | Software (On-site) | Contributor(s): Drew LaMar
R provides a powerful and comprehensive system for analysing data and when used in conjunction with the R-commander (a graphical user interface, commonly known as Rcmdr) it also provides one that is easy and intuitive to use.
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R Reference Card
02 Sep 2015 | Teaching & Reference Material | Contributor(s): Tom Short
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/840by Tom Short, EPRI PEAC, tshort@epri-peac.com 2004-11-07Granted to the public domain. See www.Rpad.org for the source and latest version. Includes material from R...
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R Reference Card
02 Sep 2015 | Teaching & Reference Material | Contributor(s): Tom Short
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/840by Tom Short, EPRI PEAC, tshort@epri-peac.com 2004-11-07Granted to the public domain. See www.Rpad.org for the source and latest version. Includes material from R...
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Theory, models and biology
28 Aug 2015 | Teaching & Reference Material | Contributor(s): Wenying Shou, Carl T Bergstrom, Arup K Chakraborty, Frances K Skinner
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/861Theoretical ideas have a rich history in many areas of biology, and new theories and mathematical models have much to offer in the future.
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Calculus, Zombies, Community, and QUBES
25 Aug 2015 | Teaching & Reference Material | Contributor(s): Carrie Diaz Eaton
This resource has been updated - find the current version here: https://qubeshub.org/publications/225At the interface of mathematics and biology emerges not only new research, but also a resurging call for education to meet the demands of this research. Reports suggest foundational...
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R Shiny Basics
17 Aug 2015 | Teaching & Reference Material | Contributor(s): Claire K. Lunch, Christine M. Laney
A nice introduction to building apps with R Shiny. Written by the folks at NEON (National Ecological Observatory Network).
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R Shiny Basics
17 Aug 2015 | Teaching & Reference Material | Contributor(s): Claire K. Lunch, Christine M. Laney
A nice introduction to building apps with R Shiny. Written by the folks at NEON (National Ecological Observatory Network).
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Rstudio cheatsheets
17 Aug 2015 | Teaching & Reference Material
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/839Cheatsheets are quickstart guides to using some of the most popular packages and features of Rstudio. This link will direct you to the following cheatsheets:Shiny...
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Rstudio cheatsheets
17 Aug 2015 | Teaching & Reference Material
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/839Cheatsheets are quickstart guides to using some of the most popular packages and features of Rstudio. This link will direct you to the following cheatsheets:Shiny...
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Breeding synchrony in colonial birds: from local stress to global harmony
02 Aug 2015 | Teaching & Reference Material | Contributor(s): Roger Jovani, Volker Grimm
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/871This is a supplemental resource for Agent-based and Individual-based Modeling: a practical introduction by Railsback and Grimm (2012). This is a reprint from...
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The ODD protocol: A review and first update
01 Aug 2015 | Teaching & Reference Material | Contributor(s): Volker Grimm, Uta Berger, Donald L. DeAngelis, J. Gary Polhill, Jarl Giske, Steven F. Railsback
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/865The ‘ODD’ (Overview, Design concepts, and Details) protocol was published in 2006 to standardize the published descriptions of individual-based and agent-based...
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QUBES: a community focused on supporting teaching and learning in quantitative biology
30 Jul 2015 | Teaching & Reference Material | Contributor(s): Sam S Donovan, Carrie Diaz Eaton, Tom Gower, Kristin Jenkins, Drew LaMar, DorothyBelle Poli, Bob Sheehy, Jeremy M Wojdak
This resource has been updated - find the current version here: https://qubeshub.org/publications/226This letter provides an overview of the Quantitative Undergraduate Biology Education and Synthesis (QUBES) Project funded through the National Science Foundation. The project has five...
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Quantitative Evolutionary Biology on the QUBESHub
27 Jul 2015 | Teaching & Reference Material | Contributor(s): Kristin Jenkins
This resource has been updated - find the current version here: https://qubeshub.org/publications/227Welcome to QUBESHub - a virtual meeting space, resource center and collaborative environment for you to enhance quantitative biology in your undergraduate courses. This space is highly...