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POPULUS Evolutionary forces
03 Feb 2015 | Teaching & Reference Material | Contributor(s): Jonathan M. Brown
This lab is focused on understanding how evolutionary forces - including mutation, genetic drift, migration, and selection - result in changes in population allele frequencies.
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POPULUS Genetic Drift Computer Simulation
30 Jan 2015 | Teaching & Reference Material | Contributor(s): Joanna Vondrasek, Janis Antonovics, Doug Taylor
A stand-alone lab exercise developed for the Evolution course at the University of Virginia. Explores the effects of population size and initial allele frequency on the loss/fixation of alleles.
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POPULUS Lotka - Volterra, the logistic equation & Isle Royale
13 Feb 2015 | Teaching & Reference Material | Contributor(s): Stephen Malcolm
Laboratory exercise explores predator-prey dynamics using Populus.
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POPULUS Simulations of interspecific competition using the Lotka-Volterra model
13 Feb 2015 | Teaching & Reference Material | Contributor(s): Scott Creel
Explores the Lotka-Volterra model of interspecific competition using Populus.
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Principles of Biology BI212, Portland State University
28 Mar 2018 | Teaching & Reference Material | Contributor(s): Daniel J. Ballhorn
The uploaded document is the official of the second section of Principles of Biology (BI212, Winter 2018), Portland State University
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Project MOSAIC
23 Jan 2015 | Teaching & Reference Material | Contributor(s): Daniel Kaplan, Karl-Dieter Crisman, Nicholas Horton, Eric Marland, Randall Pruim
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/825From the project website: Project MOSAIC is a community of educators working to develop a new way to introduce mathematics, statistics, computation and modeling...
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Q4B: Questions For Biology
08 Dec 2015 | Teaching & Reference Material | Contributor(s): Gulnur Birol, Greg Bole, Sunita Chowrira, Bridgette Clarkston, Thomas Deane, Malin Hansen, Erica Jeffery, Pam Kalas, Kathy Nomme, Rosemary Oh-McGinnis, Angie O’Neill, Carol Pollock, Joan Sharp, Karen Smith, Michelle Tseng
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/908The Questions For Biology (Q4B) team aims to create validated concept inventories for use in diagnosing student misconceptions, informing teaching practices and tracking...
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Quantitative Evolutionary Biology on the QUBESHub
27 Jul 2015 | Teaching & Reference Material | Contributor(s): Kristin Jenkins
This resource has been updated - find the current version here: https://qubeshub.org/publications/227Welcome to QUBESHub - a virtual meeting space, resource center and collaborative environment for you to enhance quantitative biology in your undergraduate courses. This space is highly...
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Quantitative Modules to accompany general biology courses
06 Feb 2015 | Teaching & Reference Material | Contributor(s): Lou Gross, Susan Harrell Yee, Monica Beals
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/828This collection of about 50 modules were developed to accompany general biology courses and allow instructors to add some quantitative examples in many of the topics in a...
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Quantitative Reasoning: Peer Review 16(3), 2014
27 Mar 2015 | Teaching & Reference Material | Contributor(s): Shelly Johnson Carey
This resource has been updated - find the current version here:https://qubeshub.org/qubesresources/publications/862In this issue of the journal Peer Review, the authors discuss the issues surrounding quantitative literacy. From the journal:...
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QUBES: a community focused on supporting teaching and learning in quantitative biology
30 Jul 2015 | Teaching & Reference Material | Contributor(s): Sam S Donovan, Carrie Diaz Eaton, Tom Gower, Kristin Jenkins, Drew LaMar, DorothyBelle Poli, Bob Sheehy, Jeremy M Wojdak
This resource has been updated - find the current version here: https://qubeshub.org/publications/226This letter provides an overview of the Quantitative Undergraduate Biology Education and Synthesis (QUBES) Project funded through the National Science Foundation. The project has five...
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R Commander
04 Sep 2015 | Software (On-site) | Contributor(s): Drew LaMar
R provides a powerful and comprehensive system for analysing data and when used in conjunction with the R-commander (a graphical user interface, commonly known as Rcmdr) it also provides one that is easy and intuitive to use.
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R for biologists
18 May 2015 | Teaching & Reference Material | Contributor(s): Marco Martinez
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/815An introductory guide to data analysis in R for life sciences researchers.
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R Reference Card
02 Sep 2015 | Teaching & Reference Material | Contributor(s): Tom Short
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/840by Tom Short, EPRI PEAC, tshort@epri-peac.com 2004-11-07Granted to the public domain. See www.Rpad.org for the source and latest version. Includes material from R...
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R Shiny App Example
09 May 2018 | Software (On-site) | Contributor(s): Drew LaMar
This is a simple example used to demonstrate what is needed to host your R Shiny app on QUBESHub.
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R Shiny Basics
17 Aug 2015 | Teaching & Reference Material | Contributor(s): Claire K. Lunch, Christine M. Laney
A nice introduction to building apps with R Shiny. Written by the folks at NEON (National Ecological Observatory Network).
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Radiant
16 Sep 2015 | Software (On-site)
Business analytics using R and Shiny.
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Radiant Lite
24 Jul 2019 | Software (On-site) | Contributor(s): Drew LaMar
Stripped down version of Radiant on QUBES
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Revolutionizing the Use of Natural History Collections in Education
10 Mar 2015 | Teaching & Reference Material | Contributor(s): Karen E. Powers, L. Alan Prather, Joesph A. Cook, James Woolley, Henry L. Bart Jr., Anna K. Monfils, Petra Sierwald
Using natural history collections, both physical specimens and archive data, promises to connect classroom learning with the real world of science. From the article: "Natural history collections are an irreplaceable and extensive record of life, and form the basis of our...
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Rstudio cheatsheets
17 Aug 2015 | Teaching & Reference Material
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/839Cheatsheets are quickstart guides to using some of the most popular packages and features of Rstudio. This link will direct you to the following cheatsheets:Shiny...