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  1. Outstanding Oaks: Quercus phenology at NEON sites

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    09 Oct 2018 | Software (On-site) | Contributor(s): Jackie Matthes

    This app visualizes data from the National Ecological Observatory Network (NEON) observations of oak phenology at three different sites.

  2. Principles of Biology BI212, Portland State University

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    28 Mar 2018 | Teaching & Reference Material | Contributor(s): Daniel J. Ballhorn

    The uploaded document is the official of the second section of Principles of Biology (BI212, Winter 2018), Portland State University

  3. Introduction to Genome Browser: What is a Gene?

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    21 Feb 2018 | Teaching & Reference Material | Contributor(s): Joyce Stamm

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/850 Genes encode information that our cells use to carry out their functions. In particular,...

  4. Introduction to Genome Browser: What is a Gene?

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    21 Feb 2018 | Teaching & Reference Material | Contributor(s): Joyce Stamm

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/850 Genes encode information that our cells use to carry out their functions. In particular,...

  5. Citations

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    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Louise Mead, James Smith, Wendy Johnson, Michael Wiser, Robert Pennock, Amy Lark

    We present an inquiry-based curriculum based on the digital evolution platform Avida-ED (http://avida-ed.msu.edu). We designed an instructional sequence and lab book consisting of an introduction to Avida-ED and a set of three lessons focused on specific evolutionary concepts. These served to...

  6. Avida-ED Lab Book Summer 2017

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    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Wendy Johnson, Cory Kohn, Amy Lark, Louise Mead, Robert T Pennock, Jim Smith, Michael James Wiser

    The Summer 2017 version of the Avida-ED Lab Manual includes the addition of an exercise that covers genetic drift (Exercise 4: Exploring Population Change Without Selection) 

  7. Avida-ED Lab Book Summer 2017

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    27 Jul 2017 | Teaching & Reference Material | Contributor(s): Wendy Johnson, Cory Kohn, Amy Lark, Louise Mead, Robert T Pennock, Jim Smith, Michael James Wiser

    The Summer 2017 version of the Avida-ED Lab Manual includes the addition of an exercise that covers genetic drift (Exercise 4: Exploring Population Change Without Selection) 

  8. Pokemon Go and Ecology

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    17 Feb 2017 | Teaching & Reference Material | Contributor(s): Elizabeth C Davis-Berg, Joshua Drew, Stephanie Sardelis <stephanie.sardelis@gmail.com>

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/787These are resources associated with using Pokemon Go to teach concepts in Ecology.  They can be used from Introductory non-majors classes up through graduate classes.

  9. Mathematical models and theorems

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    01 Feb 2017 | Teaching & Reference Material | Contributor(s): Winfried Just

    In this module we introduce and compare various types of deterministic and stochastic mathematical models of disease transmission. We then illustrate how one can derive predictions of these models in the form of mathematical theorems.Level: Advanced undergraduate and graduate students of...

  10. The Evolution (and Coevolution) of Flowering Plants

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    02 Dec 2016 | Teaching & Reference Material | Contributor(s): Anna Monfils, Debra Linton, Libby Ellwood, Molly Phillips

    This resource has been updated - find the current version here: https://qubeshub.org/publications/277In this laboratory exercise, students will explore the diversity of flower and fruit adaptations that have evolved to accomplish pollination and seed dispersal and investigate the...

  11. An Investigation of Island Biogeography using Data from Online Natural History Collections

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    02 Dec 2016 | Teaching & Reference Material | Contributor(s): Libby Beckman, Yadeeh Sawyer, Kayce Bell, Joseph Cook

    This resource has been updated - find the current version here: https://qubeshub.org/publications/278This module guides students through tests of two fundamental rules of island biogeography using specimens collected from the Alexander Archipelago in Southeastern Alaska. The module was...

  12. Introduction to Probability, Statistics, and Random Processes

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    07 Nov 2016 | Teaching & Reference Material | Contributor(s): Hossein Pishro-Nik

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/896Check out the textbook called Introduction to Probability, Statistics, and Random Processes by Hossein Pishro-Nik. From the website: "It is an open access...

  13. Free Introduction to Python for Data Science Course at DataCamp

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    06 Nov 2016 | Teaching & Reference Material | Contributor(s): Drew LaMar

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/915Python is a general-purpose programming language that is becoming more and more popular for doing data science. Companies worldwide are using Python to harvest insights from...

  14. Free Introduction to R Course at DataCamp

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    06 Nov 2016 | Teaching & Reference Material | Contributor(s): Drew LaMar

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/914In this introduction to R, you will master the basics of this beautiful open source language, including factors, lists and data frames. With the knowledge gained in this...

  15. DataCamp

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    06 Nov 2016 | Teaching & Reference Material | Contributor(s): Drew LaMar

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/913The Easiest Way to Learn Data Science OnlineMaster data analysis from the comfort of your browser, at your own pace, tailored to your needs and expertise. Whether...

  16. Mutation and Selection: An Exploration of Antibiotic Resistance in Serratia marcescens

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    15 Sep 2016 | Teaching & Reference Material | Contributor(s): Laurel Hester, Mark Sarvary, Corey Ptak

    This resource has been updated - find the current version here:  https://qubeshub.org/qubesresources/publications/875I published this paper with Mark Sarvary and Corey Ptak in the 2014 Proceedings of the Association for Biology Laboratory Education based on a laboratory module we...

  17. Bald Eagle Module Introductory Powerpoint and Lab Report Rubric

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    20 May 2016 | Teaching & Reference Material | Contributor(s): Dustin Wilgers

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/836This is the powerpoint I used to introduce the bald eagle activity. It is fairly barebones as most of my powerpoints are. I also felt it necessary to modify the lab report...

  18. Modeling: A Primer - The crafty art of making, exploring, extending, transforming, tweaking, bending, disassembling, questioning, and breaking models

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    26 Feb 2016 | Teaching & Reference Material | Contributor(s): William Wimsatt, Jeff Schank

    This resource has been updated - find the current version here: https://qubeshub.org/publications/346Explore how to use, analyze, and criticize some important and historically influential models in biology in this text only module.

  19. DataONE Module 01: Why Data Management?

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    03 Jan 2016 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/911Trends in data collection, storage and loss, the importance and benefits of data management, and an introduction to the data life cycle.Slides (PPTX)One page...

  20. DataONE Module 03: Data Management Planning

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    03 Jan 2016 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/910Benefits of a data management plan (DMP), DMP components, tools for creating a DMP, NSF DMP information, and a sample DMP.Slides (PPTX)One page handout...

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