Tags: bioinformatics

All Categories (1-20 of 232)

  1. Héctor Javier

    https://qubeshub.org/community/members/28113

  2. Marten Meckelburg

    https://qubeshub.org/community/members/28091

  3. Cheryl Y Bardales

    https://qubeshub.org/community/members/27311

  4. Using Open-Source Bioinformatics and Visualization Tools to Explore the Structure and Function of SARS-CoV-2 Spike Protein

    18 Mar 2022 | Teaching Materials | Contributor(s):

    By Laura L. Listenberger1, Cassandra M. Joiner1, Cassidy R. Terrell*2

    1. St. Olaf College 2. University of Minnesota

    The relationship between protein structure and function is a foundational concept in undergraduate biochemistry. We find this theme is best presented with assignments that encourage exploration and...

    https://qubeshub.org/publications/2862/?v=1

  5. Wenxiang 3.0

    01 Mar 2022 | Teaching Materials | Contributor(s):

    By John R Jungck1, Metehan Cebeci2

    1. Interdisciplinary Science Learning Center at the University of Delaware 2. University of Delaware

    Wenxiang diagrams illustrate protein helices as spirals on a plane and thus have the advantage overhelical wheels of being planar graphs. Wenxiang 3.0 extends the original version by adding...

    https://qubeshub.org/publications/2889/?v=1

  6. Rajkumar Soni

    https://qubeshub.org/community/members/26327

  7. Elizabeth Jockusch

    https://qubeshub.org/community/members/26149

  8. Introduction to nucleotide sequence analysis and protein modeling in MEGA and PyMol using coronavirus SARS-CoV-2

    03 Feb 2022 | Teaching Materials | Contributor(s):

    By Maria Shumskaya1, Christopher Zambell1, Nicholas Lorusso2

    1. Kean University 2. University of North Texas at Dallas

    Introduction into computational approaches in phylogeny and protein modeling based on coronavirus SARS-CoV-2 (caused COVID-19 pandemic). Two self-guided tutorials for standard lab classes of 2.5...

    https://qubeshub.org/publications/1796/?v=3

  9. Margaret M Young

    https://qubeshub.org/community/members/25973

  10. Kathleen Seiler

    https://qubeshub.org/community/members/25854

  11. Using Bioinformatics and Molecular Visualization to Develop Student Hypotheses in a Malate Dehydrogenase Oriented CURE

    14 Jan 2022 | Teaching Materials | Contributor(s):

    By Kevin P Callahan1, Tamara Mans2, Jing Zhang3, Ellis Bell4, Jessica Bell*4

    1. St John Fisher College 2. North Hennepin Community College 3. University of Nebraska-Lincoln 4. University of San Diego

    Developing student creativity and ability to develop a testable hypothesis represents a significant challenge in most laboratory courses. This lesson demonstrates how students use facets of...

    https://qubeshub.org/publications/2782/?v=1

  12. Maura Pavao

    https://qubeshub.org/community/members/25717

  13. Juliana Aparecida Santos

    https://qubeshub.org/community/members/25248

  14. A 360˚ View of COVID-19

    30 Nov 2021 | Teaching Materials | Contributor(s):

    By Nikolaos Tsotakos1, Victoria Del Gaizo Moore2, Lisa Z. Scheifele3, Michael J. Wolyniak4, Joseph W. Chihade5, Joseph J. Provost6, Jennifer A. Roecklein-Canfield*7

    1. Penn State Harrisburg 2. Elon University 3. Loyola University Maryland 4. Hampden-Sydney College 5. Carleton College 6. University of San Diego 7. Simmons University

    In March 2020, institutions underwent a massive transition to distance learning as a result of the COVID-19 pandemic. With so little time to devise new materials to maximize learning in the new...

    https://qubeshub.org/publications/2790/?v=1

  15. Wenxiang 3.0

    30 Nov 2021 | Teaching Materials | Contributor(s):

    By John R. Jungck1, Metehan Cebeci2

    1. Interdisciplinary Science Learning Center at the University of Delaware 2. University of Delaware

    Wenxiang diagrams illustrate protein helices as spirals on a plane and thus have the advantage overhelical wheels of being planar graphs. Wenxiang 3.0 extends the original version by adding...

    https://qubeshub.org/publications/2803/?v=1

  16. Mindy Wilson

    https://qubeshub.org/community/members/24953

  17. Andrew Colasanti

    https://qubeshub.org/community/members/24180

  18. Single Cell Insights Into Cancer Transcriptomes: A Five-Part Single-Cell RNAseq Case Study Lesson

    24 Sep 2021 | Teaching Materials | Contributor(s):

    By Leigh Ann Samsa*1, Melissa Eslinger2, Adam Kleinschmit3, Amanda Solem4, Carlos C. Goller*1

    1. North Carolina State University 2. United States Military Academy 3. University of Dubuque 4. Hastings College

    There is a growing need for integration of “Big Data” into undergraduate biology curricula. Transcriptomics is one venue to examine biology from an informatics perspective. RNA sequencing has...

    https://qubeshub.org/publications/2753/?v=1

  19. Renato Augusto Corrêa dos Santos

    https://qubeshub.org/community/members/23792

  20. A CURE for <em>Salmonella</em>: A Laboratory Course in Pathogen Microbiology and Genomics

    15 Sep 2021 | Teaching Materials | Contributor(s):

    By Sophie K. Jurgensen1, Joseph Harsh2, James B. Herrick*2

    1. James Madison University, Louisiana State University 2. James Madison University

    Rapid advances in genomics and bioinformatics, the vast amount of data generated by next-generation sequencing, and the penetration of the ‘-omics’ into many areas of biology have created a need...

    https://qubeshub.org/publications/2749/?v=1