Find information on common questions and issues.
Check on the status of your correspondences with members of the QUBES team.
CourseSource Bioinformatics Resources
09 Jun 2019 |
Posted by Carlos Christopher Goller
BIOINFORMATICS: TEACHING BIOLOGY AS A DATA SCIENCE! Removing obstacles for Integrating Bioinformatics Into Biology Curriculum
A Fun Introductory Command Line Exercise: Next Generation Sequencing Quality Analysis with Emoji!
07 Jun 2019 | Teaching Materials | Contributor(s):
By Rachael St. Jacques1, Max Maza1, Sabrina Robertson2, Guoqing Lu3, Andrew Lonsdale4, Ray A Enke5
1. Department of Biology, James Madison University 2. Department of Psychology & Neuroscience, University of North Carolina at Chapel Hill 3. Department of Biology and School of Interdisciplinary Informatics, University of Nebraska Omaha 4. ARC Centre of Excellence in Plant Cell Walls, Melbourne University 5. James Madison University
This resource is a fun computer-based intro to command line programming. The activity takes FASTQ NGS data files and runs a fun program called FASTQE.
Expanding Undergraduate Participation in Computational Biology: Resources and Lessons Learned from a Hands-on Workshop
05 Jun 2019 | Teaching Materials | Contributor(s):
By Layla Oesper
Presentation on computational biology in undergraduate education at the 2019 Great Lakes Bioinformatics Conference
The ml4bio Workshop: Machine Learning Literacy for Biologists
02 Jun 2019 | Teaching Materials | Contributor(s):
By Fangzhou Mu1, Chris Magnano1, Debora Treu2, Anthony Gitter1
1. University of Wisconsin - Madison 2. Morgridge Institute for Research
Presentation on machine learning literacy for biologists at the 2019 Great Lakes Bioinformatics Conference
Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach
29 May 2019 | Teaching Materials | Contributor(s):
By Ami Erickson
This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein...
Interdisciplinary biology education: a holistic approach to an intractable problem
21 May 2019 | Teaching Materials | Contributor(s):
By Kristin Jenkins
Presentation on interdisciplinary biology education at the 2019 Great Lakes Bioinformatics Conference
NIBLSE Incubators: A community-based model for the development of bioinformatics learning resources
By Michael Sierk1, Sam S Donovan2, Bill Morgan3, Hayley Orndorf2, Mark A. Pauley4, Sabrina Robertson5, Elizabeth F Ryder6, William Tapprich7
1. Saint Vincent College 2. University of Pittsburgh 3. The College of Wooster 4. University of Nebraska at Omaha 5. UNC-Chapel Hill 6. Worcester Polytechnic Institute 7. University of Nebraska-Omaha
Presentation on NIBLSE incubators at the 2019 Great Lakes Bioinformatics Conference
May 19 2019
Great Lakes Bioinformatics Conference
Sequence Similarity Resource Adaptation: Exploring Ebola Virus
16 May 2019 | Teaching Materials | Contributor(s):
By William Tapprich
University of Nebraska-Omaha
This adaptation of the sequence similarity resource provides biology students with a basic set of bioinformatics concepts and tools. These concepts and tools are used to explore relationships...
Population Demography in Swirl
15 May 2019 | Teaching Materials | Contributor(s):
By Emily Weigel
Georgia Institute of Technology
The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.
Margaret S Saha
Katie Lauren Rogers
Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses
02 May 2019 | Teaching Materials | Contributor(s):
By Adam Kleinschmit1, Benita Brink1, Steven Roof2, Carlos Christopher Goller3, Sabrina Robertson3
1. Adams State University 2. Fairmont State University 3. North Carolina State University
This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.