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The Impact of Diet and Antibiotics on the Gut Microbiome: Distance Education Variant
30 Aug 2021 | Teaching Materials | Contributor(s):
By Birgit M. Prüβ
North Dakota State University
The goal of this article is to describe a variation of an active learning exercise that was previously published by the same author under a similar title. The variation describes modifications...
The impact of diet and antibiotics on the gut microbiome
29 Aug 2021 | Teaching Materials | Contributor(s):
By Birgit M. Prüβ*
The goal of this article is to describe an active learning exercise that can be used in a variety of advanced microbiology courses, including bacterial physiology, ecology, or systems biology. The...
Using QIIME to Interpret Environmental Microbial Communities in an Upper Level Metagenomics Course
27 Aug 2021 | Teaching Materials | Contributor(s):
By Julia L. Stevens1, Riley DeHority2, Carlos Christopher Goller2
1. North Carolina State University, North Carolina Museum of Natural Sciences 2. North Carolina State University
Metagenomics is rapidly evolving due to advances in sequencing technologies and bioinformatics, but without proper training to interpret these datasets, student understanding remains limited. Aimed...
You and Your Oral Microflora: Introducing non-biology majors to their “forgotten organ”
22 Aug 2021 | Teaching Materials | Contributor(s):
By Anna K. Strain1, Kieng B. Vang1
University of Minnesota
With limited time available for laboratory activities, introductory science courses for non-science majors typically use the laboratory period to reinforce material that was previously presented...
Team microBIOME Fall 2020 - DIY microbiome analysis
25 Nov 2020 | Teaching Materials | Contributor(s):
By Davida Smyth1, Alice Tarun2, Christine Girtain3, Melanie Lenahan4, Maira Goytia, Khuanchivin Geena Sompanya5, Theodore Muth6
1. The New School 2. Alfred State College 3. Toms River Regional School NJ 4. Raritan Valley Community College 5. CUNY 6. CUNY Brooklyn College
This is our final team report for this year's BIOME Institute 2020. Learn about what we got up to and what we're planning for Spring 2021. If you want more information on REMNet go...
Microbiomes forAll: The Research Experiences in Microbiomes Network
21 Jul 2020 | Teaching Materials | Contributor(s):
By Jessica Joyner1, Davida Smyth2, Avrom Caplan3, Theodore Muth4
1. Georgia State University 2. The New School 3. Pace University 4. CUNY Brooklyn College
Poster on REMNet presented at the 2020 BIOME Institute: Cultivating Scientific Curiosity
Nicole M. Vega-Cotto
Douglas F Dluzen
A Fun Introductory Command Line Exercise: Next Generation Sequencing Quality Analysis with Emoji!
07 Jun 2019 | Teaching Materials | Contributor(s):
By Rachael St. Jacques1, Max Maza1, Sabrina Robertson2, Guoqing Lu3, Andrew Lonsdale4, Ray A Enke5
1. Department of Biology, James Madison University 2. Department of Psychology & Neuroscience, University of North Carolina at Chapel Hill 3. Department of Biology and School of Interdisciplinary Informatics, University of Nebraska Omaha 4. ARC Centre of Excellence in Plant Cell Walls, Melbourne University 5. James Madison University
This resource is a fun computer-based intro to command line programming. The activity takes FASTQ NGS data files and runs a fun program called FASTQE.
28 Feb 2019 | Teaching Materials | Contributor(s):
Geoscience Methods and Resources for K-5 Pre-Education Majors
28 May 2018 | Teaching Materials | Contributor(s):
By James Burton Deemy
College of Coastal Georgia
: Exploring Geoscience Methods was an excellent capstone experience for Elementary Education Majors. The class I used this module with was 24 students of various backgrounds and academic...
Maternal transmission of microbiome
20 Feb 2018 | Teaching Materials | Contributor(s):
By Tamar Goulet1, Sharon Maureen Homer-Drummond2
1. University of Mississippi 2. Tri-County Technical College
Understanding the cascading effects of the transfer of maternal microbiome during a vaginal birth (vs. a c-section) to the well-being of a newborn.
Aeriel Danielle Belk
Rachel Lee Nelson