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Working with Datasets in R swirl
15 May 2019 | Teaching Materials | Contributor(s):
By Caitlin Hicks Pries
The goal of this lesson is to learn how to import datasets into R, understand variable types, make adjustments to variables, perform basic calculations, and begin data visualization. The exercise...
10 May 2019 | Teaching Materials | Contributor(s):
By Susan Butts1, Talia Karim2, Chris Norris1
1. Yale Peabody Museum of Natural History 2. University of Colorado, Boulder
Create a gallery of fossil organisms and identify distinctive body parts (wings, suckers, modified appendages) from the collection. Analyze and interpret these features to predict what type of...
Calling Bull in an Age of Big Data with R
26 Apr 2019 | Teaching Materials | Contributor(s):
By Carrie Diaz Eaton
Use the calling bull course to introduce students to data, ethics, visualization, and R.
Calling Bull: Data Reasoning in a Digital World
By Carl Bergstrom1, Jevin West1
University of Washington
"So, the aim of this course is to help students navigate the bullshit-rich modern environment by identifying bull seeing through it, and combating it with effective analysis and argument."
Data is the New Science
12 Apr 2019 | Teaching Materials | Contributor(s):
By Anna Monfils1, Debra Linton1, Libby Ellwood2, Molly Phillips3
1. Central Michigan University 2. iDigBio 3. iDigBio, Florida Museum of Natural History, University of Florida
In this module, students will be introduced to some emerging biodiversity data resources. They will be asked to think critically about the strengths and utility of these data resources and apply...
Following the Data
09 Apr 2019 | Teaching Materials | Contributor(s):
By Anna Monfils1, Debra Linton1, Molly Phillips2, Libby Ellwood3
1. Central Michigan University 2. iDigBio, Florida Museum of Natural History, University of Florida 3. iDigBio
The video and exercise provides insight into how researchers are using digital data resources to investigate biodiversity in prairie fen wetlands.
Fantastic Birds and Where to Find Them
20 Mar 2019 | Teaching Materials | Contributor(s):
By Molly Phillips1, Kathryn Green2
1. iDigBio, Florida Museum of Natural History, University of Florida 2. North Carolina Sate University
5E lesson plan for middle/high school aligned to NGSS standards.
Exploring Data with BISON
14 Mar 2019 | Teaching Materials | Contributor(s):
By Erica Krimmel
Natural History Museum of Los Angeles County
A module to explore aggregated observation and collection information, through BISON, or Biodiversity Information Serving Our Nation (https://bison.usgs.gov), a tool for visualizing GBIF data.
Investigating Determinants of Richness in Ephemeral and Permanent Wetlands Using Linear Models in Shiny
21 Jan 2019 | Teaching Materials | Contributor(s):
By Kristofor Voss
This resource seeks to provide a quantitative platform by which students can be taught about interactive effects using the TIEE module created by Little (2018). Key to the adaptation is the use of...
Modeling Trophic Interactions in Rice Agriculture: A Jigsaw Approach
18 Jan 2019 | Teaching Materials | Contributor(s):
By Fernando Nieto1, Kiersten Nicole Newtoff2, Kristine Grayson3, Emily Nodine4, Brian Robert Shmaefsky5
1. SUNY Old Westbury 2. Montgomery College 3. University of Richmond 4. Rollins College 5. Lone Star College - Kingwood
Students explore four different issues related to trophic interactions that affect modern rice agriculture practices and consider relationships between these issues using Lotka and Volterra...
Regulation of Gene Expression and Adipogenesis by PPAR-γ
07 Jan 2019 | Teaching Materials | Contributor(s):
By Gary Laverty1, Thomas John Peters2, Juan Sebastián Ramírez-Lugo3, Denise Levin Signorelli4, Saumya Ramanathan
1. University of Delaware 2. University of Pittsburgh 3. University of Puerto Rico-Río Piedras 4. College of Southern Nevada
Students learn about transcriptional regulation of PPAR-γ, an important controller of adipose tissue stores and energy metabolism through a drawing/coloring activity of the different components...
Plasmodium Problem Space
By Sam S Donovan
University of Pittsburgh
This problem space brings together diverse resources with the goal of helping biology teachers and learners engage in research investigations.
Understanding Trophic Interactions in Rice Agriculture: A Jigsaw Approach
05 Jan 2019 | Teaching Materials | Contributor(s):
By Kiersten Nicole Newtoff1, Fernando Nieto2, Emily Nodine3, Brian Robert Shmaefsky4, Kristine Grayson5
1. Montgomery College 2. SUNY Old Westbury 3. Rollins College 4. Lone Star College - Kingwood 5. University of Richmond
Students explore four different issues related to trophic interactions that affect modern rice agriculture practices and consider relationships between these issues.
Teaching RNAseq at Undergraduate Institutions: A tutorial and R package from the Genome Consortium for Active Teaching
04 Jan 2019 | Teaching Materials | Contributor(s):
By Mark Phillip Peterson1, Jacob T Malloy2, Vincent P Buonaccorsi2, James H Marden3
1. Viterbo University 2. Juniata College 3. Pennsylvania State University
This lesson plan was created to teach RNAseq analysis as a part of GCAT-SEEK network. It is provided here, both in finished form and with the modifiable source code, to allow flexible adaptation to...
An Introduction to the R Programming Environment
By K. A. Garrett1, P. D. Esker1, A. H. Sparks1
Kansas State University
An online module introducing students and biologists to R, published in American Phytopathological Society
Homologous chromosomes? Exploring human sex chromosomes, sex determination and sex reversal using bioinformatics approaches
By Kelsey Metzger
University of Minnesota, Rochester
In this four- part guided activity, students will learn about the structure and function of human autosomal and sex chromosomes, view and interpret gene maps, and gain familiarity with basic...
MathBench: Biodiversity Assessment of Stream Biota
21 Dec 2018 | Teaching Materials | Contributor(s):
By Rebekah Chapman
Georgia State University
The MathBench module, "The Case of the Missing Mountaintop" introduces students to the concept of biodiversity and measures used to quantify biodiversity and stream health. Students investigate the...
The nose knows: How tri-trophic interactions and natural history shape bird foraging behavior. An introduction to statistical analysis in animal behavior research
20 Dec 2018 | Teaching Materials | Contributor(s):
By Julia Burrows
Students investigate the role of olfaction and infochemicals on bird foraging behavior through two different quantitative activities where they generate hypotheses, create figures, conduct data...
MathBench Population Dynamics Module Activity
By Alida Janmaat
University of the Fraser Valley
The resource accompanies the Mystery of the Missing Housefly Population Dynamics MathBench module which explores exponential and logistic growth models. Students explore the assumptions of the...
Introduction to Python for Data Science Course
05 Nov 2018 | Teaching Materials
Free Introduction to Python for Data Science Course at DataCamp