Find information on common questions and issues.
Check on the status of your correspondences with members of the QUBES team.
A Critical Guide to the UniProtKB Flat-file Format
05 Dec 2020 | Teaching Materials | Contributor(s):
By Teresa Attwood1, GOBLET Foundation
The University of Manchester, Manchester, UK
This Critical Guide briefly presents the need for biological databases and for a standard format for storing and organising biological data.
A Critical Guide to the PDB
This Critical Guide in the Introduction to Bioinformatics series provides a brief outline of the Protein Data Bank – the PDB – the world’s primary repository of biological macromolecular structures.
A Critical Guide to Unix
04 Dec 2020 | Teaching Materials | Contributor(s):
By Teresa Attwood1, GOBLET Foundation2
1. The University of Manchester, Manchester, UK 2. Global Organisation for Bioinformatics Learning, Education & Training
This Critical Guide in the Introduction to Bioinformatics series briefly introduces the Unix Operating System, and provides a subset of some of the most helpful and commonly used commands....
Building Community-Based Approaches to Systemic Reform in Mathematical Biology Education
03 Sep 2020 | Teaching Materials | Contributor(s):
By Olcay Akman1, Carrie Diaz Eaton2, Dan Hrozencik3, Kristin Jenkins4, Kaci Thompson5
1. Illinois State University 2. Bates College and QUBES 3. Chicago State University 4. BioQUEST 5. University of Maryland
This is an open access article from Bulletins in Math Bio.
Meeting Report: Sustainability Challenges for Open Resources to promote an Equitable Undergraduate Biology Education (SCORE-UBE) Network
13 Aug 2020 | Teaching Materials | Contributor(s):
By Carrie Diaz Eaton1, Kaitlin Bonner2, Karen Cangialosi3, Bryan Dewsbury4, Maggie Diamond-Stanic5, Jason Douma6, Michelle Smith7, Jeremy M Wojdak8
1. Bates College and QUBES 2. St. John Fisher College 3. Keene State College 4. University of Rhode Island 5. Bates College 6. University of Sioux Falls 7. Cornell University 8. Radford University
We report on the SCORE-UBE Network Summit, which involved participants from multiple sectors in open educational resources (OER) in an on-going discussion about sustainability of OER in tandem with...
Atlas of Black Scholarship for Inclusive and Racially Diverse STEM Curricula – Volume I
30 Jul 2020 | Teaching Materials | Contributor(s):
By Aparna Anandkumar1, Ariel Moline2, Pascale S. Guiton2
1. Castro Valley High School & California State University East Bay 2. California State University East Bay
The contributions of Black scientists to the advancement of STEM are poorly represented in course materials. Here, we provide an Atlas of Black Scholarship to help Life Sciences and Chemistry...
Sizes, Scales, and Specialization: An activity highlighting the diversity in cell types
04 Jul 2020 | Teaching Materials | Contributor(s):
By Heather Seitz1, Jillian Marie Miller2, Joseph Esquibel3
1. Johnson County Community College 2. Roane State Community College 3. Lansing Community College
This module explores how cell size and shape varies across cell types in the human body by having students calculate relative proportions of numbers in scientific notation.
How does increasing atmospheric carbon dioxide disrupt ecological systems? Results from FACE experiments across the globe.
12 Jun 2020 | Teaching Materials | Contributor(s):
By Courtney Campany
This module synthesizes key findings from forested CO2 enrichment experiments over the last 3 decades. Students should have a basic working knowledge of climate change, ecosystem nutrient cycles...
Caribbean coral reef structure and biodiversity - Comparing boosted regression tree & multiple regression approaches
29 May 2020 | Teaching Materials | Contributor(s):
By Eric Womack
Virginia Commonwealth University
Creating and comparing boosted regression tree models to multiple regression models.
A Tough Choice in Watershed Management
08 May 2020 | Teaching Materials | Contributor(s):
By Ann E Russell
Iowa State University
In this Team-based activity, students work in teams, playing the role of natural resource managers who must decide in which region to invest limited funding for nutrient reduction in streams....
Oct 23 2019
CourseSource Writing Studio Application for January 2020
DEHPD 17 Steps in the Hiring Process
08 Aug 2019 | Teaching Materials | Contributor(s):
By Equity & Diversity in Hiring Process Committee
Higher Education Institutions in Puget Sound
A 17 step document created by people from marginalized populations for equity and diversity in hiring.
Exploring how climate will impact plant-insect distributions and interactions using open data and informatics
06 Jun 2019 | Teaching Materials | Contributor(s):
By Wendy Clement1, Kathleen Prudic2, Jeffrey Oliver3
1. The College of New Jersey 2. University of Arizona 3. University of Arizona Libraries
This teaching module provides an entry point for students to learn about data science, open data repositories (e.g., citizen science data), and species distribution modeling to study the effects of...
Developing quantitative skills for ecological data: the effects of climate warming on phenological variation and species interactions
21 Nov 2018 | Teaching Materials | Contributor(s):
By Jill Hamilton1, Zachary Tarble1
North Dakota State University
Students combine long-term observational data sets and experimental warming in an alpine meadow in Gothic, CO to test, evaluate, and interpret ecological data focusing on phenological variation and...
50 Years of Data Science
30 Oct 2018 | Teaching Materials | Contributor(s):
By David Donoho
This paper reviews some ingredients of the current “Data Science moment”, including recentcommentary about data science in the popular media, and about how/whether Data Science isreally different...
By Richard FitzHugh1, Jin-ichi Nagumo2
1. Technische Hochschule 2. University of Tokyo
The FitzHugh–Nagumo model describes a prototype of an excitable system (e.g., a neuron).
By Bodo Winter1, Sven Grawunder2
1. Department of Cognitive and Information Sciences, University of California, Merced 2. Department of Linguistics, Max Planck Institute for Evolutionary Anthropology
The dataset recorded properties of formal and informal speech registers in Korean.
Innovative Teaching Exchange: Asking Questions in Probability Class
By Queena N. Lee-Chua
Ateneo de Manila University
This is an article in MAA's Innovative Teaching Exchange that describes strategies to get students past thoughtless number crunching, guessing, and intuition when it comes to solving probability...
Statistics for Biologists
By Magdalena Skipper1, Ritu Dhand1, Helen Pearson1, Francesca Cesari1
There is no disputing the importance of statistical analysis in biological research, but too often it is considered only after an experiment is completed, when it may be too late.
Introduction to Probability, Statistics, and Random Processes
By Hossein Pishro-Nik
Electrical and Computer Engineering Department, University of Massachusetts
This site is the homepage of the textbook Introduction to Probability, Statistics, and Random Processes by Hossein Pishro-Nik.