Lesson VII - Synteny
The lesson teaches about synteny or the order of genes along a chromosome, which is useful for looking at orthologous genes between two species or strains.
Listed in Teaching Materials | resource by group Genome Solver
Version 3.0 - published on 05 Aug 2020 doi:10.25334/SGQF-1W47 - cite this
Licensed under CC Attribution-ShareAlike 4.0 International according to these terms
Description
The lesson contains a powerpoint slide deck, an exercise (which requires the download of a piece of free software called Mauve - directions are included), and the key to the exercise.
Contents
AR39_PRIPRegion.faa(FAA | 2 KB)- CWL029_PRIPRegion.faa(FAA | 1 KB)
- J138_PRIPRegion.faa(FAA | 1 KB)
- LPCoLN_PRIPRegion.faa(FAA | 2 KB)
Synteny Exercise -July2020.docx(DOCX | 8 MB)- Synteny Exercise Key-July2020.docx(DOCX | 8 MB)
Synteny_ Aug 142020 WS. pptx.pptx(PPTX | 14 MB)- TW183_PRIPRegion.faa(FAA | 1 KB)
- License terms
Cite this work
Researchers should cite this work as follows:
- Gaurav Arora, Anne Rosenwald, Vinayak Mathur (2020). Lesson VII - Synteny. Genome Solver, (Version 3.0). QUBES Educational Resources. doi:10.25334/SGQF-1W47
Tags
Notes
Materials were updated summer 2020 to reflect changes to the external tools cited in the lesson.
Genome Solver
This publication belongs to the Genome Solver group.
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