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Nextstrain adaptations for Understanding COVID-19

Author(s): Keith A. Johnson

Bradley University College of Liberal Arts and Sciences

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Summary:
This resource introduces students to the use of Nextstrain and Nextclade to visualize the phylogeny of SARS-CoV-2 variants of concern and variants of interest. Terminology and an introduction to the Nextclade resource are provided in a 4-part…

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This resource introduces students to the use of Nextstrain and Nextclade to visualize the phylogeny of SARS-CoV-2 variants of concern and variants of interest. Terminology and an introduction to the Nextclade resource are provided in a 4-part worksheet.

Licensed under CC Attribution-ShareAlike 4.0 International according to these terms

Version 1.0 - published on 20 Aug 2021 doi:10.25334/7AZA-5T38 - cite this

Keywords

  1. uniprot
  2. COVID19
  3. SARS-CoV-2
  4. Nextstrain
  5. Nextclade
  6. Spike glycoprotein
  7. Variants of Concern

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  1. Resource Type
  2. Audience Level
  3. Activity Length
  4. Open Science and Education Practices Ontology
Contents:
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Description

Students are directed through an exploration of Nextstrain and Nextclade to view the phylogeny of the SARS-CoV-2 variants with a focus on the Spike glycoprotein mutations.

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