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    Get Started With GIS in Open Source Python Workshop
    There are a suite of powerful open source python libraries that can be used to work with spatial data. Learn how to use geopandas, rasterio and matplotlib to plot and manipulate spatial data in...

    Keywords: data analysisdatadata typesdata visualizationdata scienceearth sciencepythonremote sensingGeographic Information System (GIS)data science educationcomputer programmingwildfireearth anlaytics

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    Using drones for conservation work with Eben Broadbent
    Eben N. Broadbent, PhD, is an assistant professor of forest ecology & geomatics in the School of Forest Resources and Conservation at the University of Florida, with a PhD in Biology (Ecology &...

    Keywords: ecologyconservation ecologydronesspatial ecology

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    Spatial Analysis with QGIS
    Map specimen data points using QGIS, connect them to form a polygon using the Concave Hull plugin, and calculate the range of a species to examine how it changes over time.

    Keywords: natural history collectionsspecies distributionscourse-based research experiences (CUREs)spatial analysisdigitized natural history collectionsQGIS

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    Distributions CURE- Exploring Species Distribution Changes and their Drivers
    This course-based undergraduate research experience (CURE) uses digitized natural history collections data to answer questions about species distributions and their drivers. This inclusive CURE can...

    Keywords: Evolutionecologyidigbiodata management#iNaturalistcourse based undergraduate research experienceshuman impactsspecies distributionscourse-based research experiences (CUREs)digitized natural history collectionsGBIFQGISBCEENETgeoreferencing

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    Sexual Dimorphism CURE: Exploring Melanized Wing Patterns of Pieridae Butterflies
    Teach a Course-based Undergraduate Research Experience (CURE) using digitized natural history collections data to test hypotheses on sexually dimorphic wing melanization patterns of Pieris rapae...

    Keywords: data analysismorphologyidigbiosexual dimorphismdata managementImageJsexual selectionnatural history collectionsbutterflycourse-based research experiences (CUREs)digitized natural history collectionsQGISmorphometricsBCEENETgeoreferencing

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    Data-Driven Decision-Making: Antarctic Fisheries
    This is an entire module for a general education data science and ecology course. The module was originally designed as the fourth and final section of the course; the full course is openly...

    Keywords: population growthRStudiodata visualizationexponential growthlogistic growthR Markdownspatial dataocean sustainability4DEE FrameworkTraditional ecological knowledgecarrying capacityEcosystem Servicesmaximum sustainable yield

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    Count me in: Increasing early detection of invasive species with community science
    In this lesson, students interpret a map of species occurrences. Then, students view and reflect on an interview with biologist Dr. Jennifer Dean, whose research includes the map that they...

    Keywords: graph interpretationInvasive SpeciesAquatic invasive speciesspatial datawomen in steminvasive plantsCitizen and Community ScienceBioGraphIrepresentation in STEMmap interpretationiMapInvasives

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    Module M.8 Survival analysis
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

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    Measuring Size and Area of Digitized Specimens using ImageJ
    Use ImageJ to analyze morphological characters in digital images of natural history specimens. Skills are transferable to many organisms and other morphological measurements.

    Keywords: ImageJnatural history collectionscourse-based research experiences (CUREs)digitized natural history collections

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    Module M.4 Simple linear regression analysis
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

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    Pedigree Unspoken Assumptions
    A video that highlights the unspoken assumptions that we use in pedigree analysis.

    Keywords: geneticsintroductory biologybiologybiology teachingVideoGenetics educationGeneral biology educationpedigreePedigree analysisassumptionsunspoken assumptionsskit

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    CYTOSKELETON - Microtubule Dynamics in the Cell Cycle
    This module contains exercises designed to help upper-level cell biology students understand the dynamics of microtubule polymerization and depolymerization within the cell cycle and how cancer...

    Keywords: cell biologyQuantitative reasoningInterdisciplinary STEMInterpreting GraphsCytoskeletonScientific reasoningdimensional analysisNIQBC2. Data and GraphsC6. Quantitative LanguageC1. Numeracy

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    Linear Regression (Excel) and Cellular Respiration for Biology, Chemistry and Mathematics
    Students typically find linear regression analysis of data sets in a biology classroom challenging. These activities could be used in a Biology, Chemistry, Mathematics, or Statistics course. The...

    Keywords: statisticsmathematicsdata analysisdatalinear regressionbiologyonlinegraphinglinear equationsQuantitative reasoningassessmentcollege algebracellstatistical analysisregressionOERAlgebrachemistryModelscorrelationSimple Linear RegressionMicrosoft Excellab activityexperimentCellular ProcessesATPqbccUsing Excelmanipulate equationsCellular and Molecular BiologyConcepts in Statisticsoxidationline of best fitexplaining statisticsusing statisticsCellular RespirationPredictionsRespirationgraphing in ExcelLinear CorrelationExothermic Reactioncreate scatter plotAdenosine Triphosphate (ATP)germinating peasPre-lab activityStudent activityHybridCollecting DataR-squareRegression ModelFunctionDependent VariablesIndependent VariablesLinear EquationLinear Equation in two variablescreate graphcreate equationcreate regressioncreate plotinterpret regressioninterpret data

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    Effect of the Intestinal Protein Snakeskin on the Lifespan of Fruit Flies: A Kaplan-Meier Survival Analysissource Draft (1)
    In this activity, students perform the Kaplan-Meier survival analysis on raw data obtained from an experiment that explores the effect of overexpressing the Snakeskin (Ssk) protein on the lifespan...

    Keywords: graphingBiochemistryhypothesis testingcalculus and biologyapproximating areas under curvesqbccCellular and Molecular BiologyCreate graphsInterpret graphsSolving Equations and Inequalitiesinterpret tablesConcepts in Statisticsusing statisticschi-square analysissurvival analysis

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    Module M.7 Generalized linear mixed-effects models
    Introduction to Primate Data Exploration and Linear Modeling with R was created with the goal of providing training to undergraduate biology students on data management and statistical analysis...

    Keywords: R programming languageprimatespopulation ecology

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    Introduction to Version Control and Git Workshop
    Learn how to use version control with Git to work collaboratively and back up your work.

    Keywords: data analysisdatadata typesdata scienceearth sciencepythonremote sensinggithubversion controldata science educationcomputer programmingwildfireearth analyticsvgeographic information systems

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    REMNet Tutorial, R Part 5: Normalizing Microbiome Data in R 5.2.19
    Video on normalizing microbiome data from the Research Experiences in Microbiomes Network

    Keywords: geneticsstatisticsdata analysisgraphingRStudioVideoexperimental designR programming languagemicrobiomesstudent researchinterdisciplinary educationlimnologyeco-informaticsresearch in the classroomtidyverseWorking with datasetsREMNet

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    Build Multiomic and Visualization Skills in Bioscience Lecture
    This resource promotes inclusive learning by using all free platforms to extend the central dogma to an applied experience. Genomics is focused on with literature reviews that are performed to...

    Keywords: geneticsBiochemistryBiology and Biochemistry EduationProtein StructureBioinformatics and GenomicsFunctional GenomicstranscriptomicsproteomicsRNAseqClinical genomicsprotein structure modelingInclusive teaching3D protein structure /function analysisinclusive classrooms3D protein structuresinclusivegene

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    Quantifying Bacterial Growth in the Guts and Hemolymph of Fruit Flies: Mathematical Modeling and Data Interpolation/Extrapolation
    In this activity, students will analyze raw data obtained from an experiment that explores the effect of overexpressing the Ssk protein in order to strengthen the intestinal barrier and prevent...

    Keywords: graphingexponential growthlinear modelsqbccinterpolationConcepts in Statistics and Precalculus Understanding exponential rates and linear slopesExtrapolation

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    Climate change and Strawberries: A real-life problem-based activity for teaching ANOVA
    This is a real-life lab activity for teaching ANOVA using Problem-Based Learning and formatted for one-day (JMP or R) or two-day (JMP) implementations.

    Keywords: climate changeProblem based learningANOVAplant sciencetwo-way ANOVA

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