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    Successful Lysogen Formation for Cluster FF Phage, QuinnAvery
    Lysogens were successful raiased for QuinnAvery, a subcluster FF phage that was isolated using Arthrobacter globiformis B-2979

    Keywords: Cluster FF

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    Settling the Debate: How does nutrient enrichment affect salt marsh resilience to sea level rise?
    This is a lesson aimed at Environmental Studies students from High School and up, we hope that students will be able to further their understanding of the ecological impact of humans, as well as...

    Keywords: statisticsRecologytool:rstudioANCOVAwetlandssalt marshesstable isotopesAnthropogenic ImpactsTidal WetlandWetland Ecologyaccretiongreenhouse gas effect

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    Trail Camera Field Survey Module
    This QUBES module introduces high school students to the exciting world of field surveys using trail cameras. Designed for environmental science classes, the module offers a hands-on approach to...

    Keywords: graphsspecies richnessCommunity EcologymammalsMicrosoft Exceldichotomous keycamera trapsShannon diversity indexTrail CamerasPivotTables

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    Evaluating the potential for immune escape: how likely is an antibody to protect against a specific SARS-CoV-2 variant?
    Commercial antibodies to the SARS-CoV-2 spike protein have been successfully used to treat people with COVID-19. Unfortunately, as the SARS-CoV-2 virus evolves, new variants have appeared that can...

    Keywords: course based undergraduate research experiencesBLASTmolecular modelingSARS-CoV-2antibodyNextstrainiCn3DSequence alignmentStructure alignment

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    Creating a Deeper Understanding of Big Geospatial Data, Volunteered Geographic Information (VGI), and Community Science using Project Eddie Modules
    This module uses the Project Eddie Module Assessing the Risk of Invasive Species Using Community Science Data developed by Heard, M. J. (2023) to create a deeper understanding of big geospatial...

    Keywords: GISInvasive SpeciesGeospatial ScienceProject EDDIEgeographyCitizen and Community Sciencegeographic information sciencevolunteering

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    Mapping Specimen Occurrence Data in QGIS
    Use digitized natural history collection occurrence data from the Global Biodiversity Information Facility (GBIF) to map the distribution of the beaver in the state of Oregon from 1800-2020 using QGIS

    Keywords: natural history collectionsspecies distributionscourse-based research experiences (CUREs)digitized natural history collectionsQGIS

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    Adaptation of Environmental Pollution & Public Health for Water and Emerging Contaminants (Project EDDIE)
    Environmental health is a field of study within public health that is concerned with human-environment interactions, and specifically, how the environment influences public well-being. In this...

    Keywords: public healthProject EDDIEwater qualitypollutionpfas

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    Environmental Pollution & Public Health (Project EDDIE) used in an introductory Environmental Challenges course
    Environmental health is a field of study within public health that is concerned with human-environment interactions, and specifically, how the environment influences public well-being. In this...

    Keywords: public healthProject EDDIEpollution

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    Green Infrastructure/Green Roofs (Project Eddie)
    Runoff in urban areas is an increasingly important issue when it comes to water quality. It is a major hydrologic issue in New York City, as urban infrastructure creates excess runoff and...

    Keywords: climate changeProject EDDIEWater cycle

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    Does Urbanization Favor Exotic Species?
    In this lesson, students will learn about the exotic European honeybee (Apis mellifera), and why they are considered an important pollinator. They will be prompted to think about the impacts of...

    Keywords: RStudiogeneral linear modelsAICurbanizationPoisson Distributionnative speciesHoneybeeexotic species

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    Modeling Changes in Probability of Presence of Myotis lucifugus Due to White Nose Syndrome: An Introduction to Logistic Regression in R
    In this lesson, students will learn more about the wildlife disease known as white nose syndrome and how it affects certain bat species more than others. Students will learn about the important...

    Keywords: ecologyconservationRStudiobatslogistic regressionGLMWildlife DiseaseWhite nose syndromelittle brown batsmyotis lucifugus

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    Green Infrastructure/Green Roofs (Project Eddie)
    Runoff in urban areas is an increasingly important issue when it comes to water quality. It is a major hydrologic issue in New York City, as urban infrastructure creates excess runoff and...

    Keywords: climate changeProject EDDIEWater cycle

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    Assessing the Risk of Invasive Species Using Community Science Data
    This module introduces students who are already familiar with GIS to doing comparative analyses with large-scale community science (often called citizen science) data sets. Students will explore...

    Keywords: Invasive SpeciesProject EDDIECitizen and Community Science

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    Environmental Pollution & Public Health (Project EDDIE)
    Environmental health is a field of study within public health that is concerned with human-environment interactions, and specifically, how the environment influences public well-being. In this...

    Keywords: public healthProject EDDIEpollution

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    Exploring Marine Primary Productivity with Descriptive Statistics and Graphing in Excel
    In this activity, students use real water chemistry data and descriptive statistics in Excel to examine primary productivity in an urban estuary of the Salish Sea. They will consider how actual...

    Keywords: statisticsecologydataExcelgraphingBiochemistryOceanographymarine ecosystemsmarine ecologydescriptive statisticslong-term datasetsmarineMicrosoft Excelmarine biologyplanktonOutliersMarine ScienceqbccUsing ExcelphytoplanktonCreate graphsInterpret graphsConcepts in Statisticslarge datasetexplaining statisticsusing statisticsPacific NorthwestSalish Seaprimary productivitywater chemistryestuarygraphing in Excelformulas in Excelchlorophylltime-series plotsocean

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    Pesticide-Driven Bee Mortality: An Introduction to Survival Analysis in R
    In this lesson, students will receive an introduction to survival analysis in R utilizing data on bee mortality caused by pesticide exposure. In their code, students will assess survivability,...

    Keywords: chi-squaredsurvivalbeespesticidesRoundupsurvival analysissurvival plotsherbicides

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    Population Demography in Swirl
    The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.

    Keywords: ecologyPopulation statisticslife history curves

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    Evaluating the potential for immune escape: how likely is an antibody to protect against a specific SARS-CoV-2 variant?
    Commercial antibodies to the SARS-CoV-2 spike protein have been successfully used to treat people with COVID-19. Unfortunately, as the SARS-CoV-2 virus evolves, new variants have appeared that can...

    Keywords: course based undergraduate research experiencesBLASTmolecular modelingSARS-CoV-2antibodyNextstrainiCn3DSequence alignmentStructure alignment

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    Hypoxia in Coastal Marine Ecosystems (Project Eddie) - Modified
    Aquatic ecosystems are home to a complex intersection of physical and biological factors and an intersection of natural and anthropogenic factors. In the Chesapeake Bay, low oxygen events have...

    Keywords: OceanographyProject EDDIEEutrophication

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    Hypoxia: A Case Study in R
    Aquatic ecosystems are home to a complex intersection of physical and biological factors and an intersection of natural and anthropogenic factors. In the Chesapeake Bay, low oxygen events have...

    Keywords: data analysisOceanographyProject EDDIE

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