You are here: Home / Resources / Browse Resources

Open. Adaptable. Free.

Resources created by our members and partners.

The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapt using open Creative Commons licenses.

Text Search:
Applied Filters
    Fitzhugh-Nagumo Model
    The FitzHugh–Nagumo model describes a prototype of an excitable system (e.g., a neuron).

    Keywords: differential equationsmathematical modeldifferential equation modelordinary differential equation modelneuroscienceexcitable

    1287

    views

    270

    downloads

    0

    comments

    0

    adaptations

    Disease Spread Simulation with M&M's and Information on the wider SIMIODE community
    This is a Student Version of a Modeling Scenario from the community, SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations at www.simiode.org

    Keywords: resourcesdifferential equationsmodelingsimulationmoduledataepidemicsdiseasecommunityapplied mathematicsResources @ SIMIODEretinal surgeryinsect colonyLSDm&mparameter estimationin-class activityproject

    1857

    views

    933

    downloads

    0

    comments

    0

    adaptations

    Fitting Exponential and Logistic Growth Models to Bacterial Cell Count Data
    In this activity, students will model a noisy set of bacterial cell count data using both exponential and logistic growth models. For each model the students will plot the data (or a linear...

    Keywords: modelingdata analysislinear regressiongraphingExponentsoptimizationcalculusInterpreting GraphsFunctionsqbccCellular and Molecular BiologyChoosing modelsUnderstanding ratesConcepts in Statisticsmeasurementsmanipulating equationscreating graphsExponential and Logarithmic Functionsinterpreting tables

    2061

    views

    2620

    downloads

    1

    comments

    0

    adaptations

    BSHS Calculus 2
    Based upon the University of Minnesota Bachelor's of Science in Health Science calculus curriculum (part 2), this course introduces linear transformations, ordinary differential equations, basic...

    Keywords: mathematicsmodelingmodulecalculuscourselinear algebracalculus 2Resources @ BioQUEST - Numbers Count

    1430

    views

    287

    downloads

    0

    comments

    0

    adaptations

    Predator-Prey Dynamics: the Lotka-Volterra Model
    This module introduces the Lotka-Volterra model in the context of understanding how predator and prey interact. It is intended for an introductory biology audience.

    Keywords: differential equationsecologypredatory-prey modelLotka-Volterrapredator-prey interactions

    1725

    views

    540

    downloads

    0

    comments

    0

    adaptations

    Why does Blood Flow Change? Investigating the Math of Blood Flow Dynamics
    This collection of activities explores the relationship between blood flow, pressure, and the factors of resistance through graphs and modeling direct and inverse variation.

    Keywords: quant biographingRatiosmathassessmentcollege algebraundergraduate educationphysiologyAnatomyhuman biologyvariationCardiovascular physiologyAnatomy & Physiologylab activityOpenStaxqbccmanipulate equationsUnderstanding fractionsChoosing modelsUnderstanding ratesEstimating answersUse elementary functionsCreate graphsInterpret graphsRates and ProportionsSolving Equations and Inequalities

    1716

    views

    1627

    downloads

    0

    comments

    0

    adaptations

    Interspecific Competition: the Lotka-Volterra Model
    This module introduces the Lotka-Volterra Model in the context of understanding interspecific competition. It is intended for an introductory biology audience.

    Keywords: differential equationsecologyLotka-Volterrainterspecific interactionsstate-space graphs

    1408

    views

    373

    downloads

    0

    comments

    0

    adaptations

    Linear Regression (Excel) and Cellular Respiration for Biology, Chemistry and Mathematics
    Students typically find linear regression analysis of data sets in a biology classroom challenging. These activities could be used in a Biology, Chemistry, Mathematics, or Statistics course. The...

    Keywords: statisticsmathematicsdata analysisdatalinear regressionbiologyonlinegraphinglinear equationsQuantitative reasoningassessmentcollege algebracellstatistical analysisregressionOERAlgebrachemistryModelscorrelationSimple Linear RegressionMicrosoft Excellab activityexperimentCellular ProcessesATPqbccUsing Excelmanipulate equationsCellular and Molecular BiologyConcepts in Statisticsoxidationline of best fitexplaining statisticsusing statisticsCellular RespirationPredictionsRespirationgraphing in ExcelLinear CorrelationExothermic Reactioncreate scatter plotAdenosine Triphosphate (ATP)germinating peasPre-lab activityStudent activityHybridCollecting DataR-squareRegression ModelFunctionDependent VariablesIndependent VariablesLinear EquationLinear Equation in two variablescreate graphcreate equationcreate regressioncreate plotinterpret regressioninterpret data

    4297

    views

    1677

    downloads

    0

    comments

    0

    adaptations

    Temperature Balance Equation Activity
    Students learn about the temperature balance equation. They then conduct a thought experiment (with a worksheet) using the components of the equation to manage their heat balance for survival on a...

    Keywords: equationtemperatureheatevaporationconductionconvectionMetabolicRadiation

    293

    views

    129

    downloads

    0

    comments

    0

    adaptations

    Hawk vs. Dove Game
    Hawk vs. Dove Game is a model of conflict for two players in game theory.

    Keywords: mathematical modelcomputational modelagent-based model

    1033

    views

    267

    downloads

    0

    comments

    0

    adaptations

    Marriage Model (with errors)
    Marriage age model for use with NetLogo and ABM material

    Keywords: computational modelagent-based modelsocial networksmarriageChapter 6Chapter 6.5

    1138

    views

    327

    downloads

    6

    comments

    0

    adaptations

    Type II Functional Response: Holling’s Disk Equation
    This module introduces the Holling’s disk equation in the context of understanding the relationship between an individual's rate of consumption and food density. It is intended for an introductory...

    Keywords: ecologyHolling's Disk Equation

    993

    views

    180

    downloads

    0

    comments

    0

    adaptations

    Evaluating Local Adaptation and Conservation with Life Tables
    This module contains a sequence of activities designed for an undergraduate ecology lesson on stage-structured population models or life tables that use published data. Two versions are provided:...

    Keywords: ecologypopulation modelmatrix modelsclimate changelife cyclessensitivity analysispopulation ecologylife tablestage-structured modelsnet reproductive rateconservation planning

    332

    views

    630

    downloads

    1

    comments

    0

    adaptations

    Wolf Sheep Predation Simulation Exercise
    This resource is an exercise to introduce students to agent-based modeling of biological systems through working with a simple existing model.

    Keywords: simulationecologyIntroductoryNetLogoagent-based modelingagent-based modelLabbioinformaticspredator-preyUndergraduateNIBLSEInstructional SettingAudience LevelActivity LengthLess than 1 hoursimulation cycleC1. Role of bioinformaticsC6. ModelsReviewed at NIBLSEagent based modleing

    2832

    views

    526

    downloads

    0

    comments

    0

    adaptations

    Buffer Preparation
    This Excel workbook calculates the necessary components to create a buffer solution using the Henderson-Hasselbalch equation.

    Keywords: buffer solutionacidbase

    107

    views

    23

    downloads

    0

    comments

    0

    adaptations

    Tension in Blood Vessels: LaPlace's Equation
    This module introduces Laplace's equation in the context of understanding tension in the walls of blood vessels. It is intended for an introductory biology audience.

    Keywords: linear equationsOpenStaxAnimal Physiology

    1059

    views

    228

    downloads

    0

    comments

    0

    adaptations

    Translocation of Nutrients in the Phloem: Poiseuille's Equation
    This module introduces the Poiseuille equation in the context of understanding nutrient flow in plant cells. It is intended for an introductory biology audience.

    Keywords: plant physiologycalculushyperbolic equationsrates of change

    1180

    views

    236

    downloads

    0

    comments

    0

    adaptations

    Pharmacokinetics
    This Excel module explores how drugs are processed and absorbed in the human body.

    Keywords: drug metabolismpharmacokinetics

    88

    views

    55

    downloads

    0

    comments

    0

    adaptations

    RAT ATTACK! Population growth
    This module contains exercises focused on the use and interpretation of density independent and density dependent population growth models. Students build logistic and exponential growth models in...

    Keywords: modelingecologyExcelintroductory biologygraphingQuantitative reasoningdata visualizationinterdisciplinaryexponential growthlogistic growthdata managementInterpreting Graphspopulation modelingNIQBC2. Data and GraphsC4. mathematical modelsnonlinear models

    692

    views

    878

    downloads

    0

    comments

    0

    adaptations

    Frayer model growth mindset
    A Frayer model worksheet for the concept of growth mindset.

    Keywords: growth mindsetFrayer model

    2132

    views

    779

    downloads

    0

    comments

    0

    adaptations

    Close

    Home

    Search