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    Circle Train Problem TCM 2018_Hernandez.pdf - Google Drive
    In this math modeling lesson, students build mathematical models for the horizontal and vertical position of a train moving along a circular track. The math topics includes transformations of...

    Keywords: mathematical modelTrigonometryPrecalculusdata collectionLoggerProtransformation of functionsparametric equations

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    More In Depth Spreadsheet Management Adaptation of Data Management using NEON Small Mammal Data
    This adaptation consists of three exercises that introduce students to 1) format spreadsheet data tables, 2) carry out spreadsheet quality control, and 3) count/sort/filter data of interest in...

    Keywords: data managementspreadsheetsmammalsCapture mark-recapture

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    A Hands-on Introduction to Hidden Markov Models
    In this Lesson, we describe a classroom activity that demonstrates how a Hidden Markov Model (HMM) is applied to predict a eukaryotic gene, focusing on predicting one exon-intron boundary. This HMM...

    Keywords: transcriptionexonintronsplicing

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    The Impact of Diet and Antibiotics on the Gut Microbiome: Distance Education Variant
    The goal of this article is to describe a variation of an active learning exercise that was previously published by the same author under a similar title. The variation describes modifications...

    Keywords: microbiomenutritionbacterial metabolitesgut bacteriahost response

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    Facilitating Scientific Literacy Through Writing: A Write-to-Learn Assignment for Large Introductory Undergraduate Biology Courses
    Write-to-learn (WTL) assignments have been used in a variety of disciplines to encourage conceptual learning and critical thinking in undergraduate education. These assignments focus on...

    Keywords: geneticsEvolutionecologyCellsPlants form and functionAnimals form and function

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    COVID-19: Molecular Basis of Infection-ADAPTATION
    This case was written in Spring 2020 during the COVID-19 pandemic. It focuses on understanding the structure and interaction of the SARS-Cov-2 viral spike protein that facilitates infection in...

    Keywords: infectionvaccinemolecular visualization and analysisCOVID19PDBSARS-CoVMolecular Case Study

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    2015-Boggess-EtAl-Mathematical Modeling in Ecology - Simulating the Reintroduction of the Extinct Passenger Pigeon
    To determine under which conditions a Passenger Pigeon could survive a reintroduction into a natural habitat, we used two types of models.

    Keywords: simulationagent-based modelingallee_effectPassenger Pigeonsforest envirnomentHolling Type III functional responseBio-energeticstree distributions

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    3-069-HeatInBar-ModelingScenario
    The temperature distribution along a uniform slender bar due to conduction and convection is investigated through experimental, analytical, and numerical approaches.

    Keywords: heat transferexperimentconductionconvectionboundary conditionsfinite volume method

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    Using Pathway Maps to Link Concepts, Peer Review, Primary Literature Searches and Data Assessment in Large Enrollment Classes: An example from teaching ecosystem ecology
    As with many other complex topics, teaching ecosystem ecology can be particularly difficult in terms of helping students understand the relationships between the various component parts. We...

    Keywords: energyecosystemNutrientsPathway

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    BioVEDA Curriculum: An Approach to Link Conceptual and Quantitative Understanding of Variation During Experimental Design and Data Analysis
    When performing a biological investigation, experts constantly cycle between conceptual and quantitative modes of thinking, integrating their understanding in both worlds to make decisions about...

    Keywords: statisticssample sizeBiological variation

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    Evaluating the potential for immune escape: how likely is an antibody to protect against a specific SARS-CoV-2 variant?
    Commercial antibodies to the SARS-CoV-2 spike protein have been successfully used to treat people with COVID-19. Unfortunately, as the SARS-CoV-2 virus evolves, new variants have appeared that can...

    Keywords: course based undergraduate research experiencesBLASTmolecular modelingSARS-CoV-2antibodyNextstrainiCn3DSequence alignmentStructure alignment

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    Bad Science: Exploring the unethical research behind a putative memory supplement
    As members of society, students must be able to evaluate scientific claims across a wide variety of media to make sound decisions about health and wellness. However, students - and most members of...

    Keywords: bioethicsevaluationPseudoscienceRecognizing bad scienceScience process skills

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    Dilution and Pipetting Lesson Using Food Dyes
    In this lesson students learn how to use micropipettors to accurately measure small volumes of liquids and perform dilutions using food dyes. Students dilute four food dyes at 10X concentration to...

    Keywords: dilutionCalculationLab SkillsMicropipetting

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    Probing Subunit Interactions in 3-Phosphoglycerate Dehydrogenase
    A research poster.

    Keywords: JoCURE

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    Building an Inclusive Botany - Structuring in Class Discussions
    Driven by the national conversation on systemic racism, ongoing inequities, appeals to decolonize science, and the many recent calls for diversity, equity, accessibility, and inclusion, we use...

    Keywords: botanyplant sciencediversityAccessibilityHistory of Sciencetraditional knowledgeCommunityScienceColonialismSpecimen Digitization

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    USE C*Sci - The Undergraduate Student Experiences with Citizen Science Network to Transform Learning and Broaden Participation in Science (RCN-UBE Introduction)
    The Undergraduate Student Experiences with Citizen and Community Science Network includes educators, researchers, and project leaders excited about the use of participatory science approaches to...

    Keywords: RCN-UBE Introduction

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    2012-Hassan_Moore-Using projects to stimulate learning in mathematics and engineering mathematics courses
    Given that time is a premium in the academy and project creation is a time consumer, three original projects, which may be injected into any Calculus III, Differential Equations, or Engineering...

    Keywords: solutionsclass projectsphysical phenomenon

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    6-070-BeerBubbles-ModelingScenario
    The goal of this project is to set up and numerically solve a first-order nonlinear ordinary differential equation (ODE) system of three equations in three unknowns that models beer bubbles that...

    Keywords: molecular forensicsBEERspherebubbleNewton' Second LawIdeal Gas Lawdrag forceHadamardStokesmole

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    3-006-Buoyancy-ModelingScenario
    We offer data from a physical experiment in which the depth of a container in water is measured and ask students to build a model of buoyancy based on Newton's Second Law of Motion and a Free Body...

    Keywords: data collectionexperimentbuoyancyNewton's Second Law of Motion

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    3-019-ShuttleCockFalling-ModelingScenario
    We are given data on the time and position of a shuttlecock as it falls to the ground from a set height. We attempt to model the falling object and we confront the different resistance terms and...

    Keywords: resistancegravityFree Body Diagramshuttlecockfallingc object

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