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    Needleman - Wunsch Algorithm Exercise
    This exercise is used in a sophomore-junior level bioinformatics course. The algorithm is introduced to the students who then complete the exercise.

    Keywords: bioinformaticsUndergraduateNIBLSEalgorithmsincubatorsAudience LevelAdvancedActivity Length1 HourNeedleman-WunschC2. Computational conceptsIncubated at NIBLSE

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    GBIF Tutorial - BLUE Resource
    A user guide and video instructions for GBIF

    Keywords: Querying databasesdatabasedata in the classroombiodiversity informaticsbiodiversity collections

    2392

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    745

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    iDigBio Tutorial - BLUE Resource
    A user guide and video instructions for iDigBio

    Keywords: databasesQuerying databasesdata in the classroombiodiversity informaticsbiodiversity collections

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    Arctos Tutorial - BLUE Resource
    A user guide and video instructions for Arctos

    Keywords: databasesdata in the classroombiodiversity informaticsbiodiversity collections

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    Data Ethics
    Data ethics and the use of digital data

    Keywords: data scienceresearch ethicsdata ethics

    1783

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    BLAST Exercises for Analyzing Cloning Results
    Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. These activities have modified Lesson 1: Introduction to Genome...

    Keywords: Bioinformatics EducationBioinformatics and Genomics

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    Databases: A Study of Influenza
    This lesson introduces the student to the Influenza Research Database. Students will select Influenza genome sequences to see how they are related. Students tests hypotheses about evolutionary...

    Keywords: Bioinformatics EducationBioinformatics and Genomicsmolecular evolutionInfluenza

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    REMNet Tutorial, R Part 5: Normalizing Microbiome Data in R 5.2.19
    Video on normalizing microbiome data from the Research Experiences in Microbiomes Network

    Keywords: geneticsstatisticsdata analysisgraphingRStudioVideoexperimental designR programming languagemicrobiomesstudent researchinterdisciplinary educationlimnologyeco-informaticsresearch in the classroomtidyverseWorking with datasetsREMNet

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    Figure of the Day - Teaching Notes - Boersma
    Teaching notes from my application of Figure of the Day in my BIOL305 Ecology lecture course for biology majors.

    Keywords: ecologygraphsmath attitudesResources @ BIOMAAPInterpreting Graphs

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    Linked Genes and Recombination: Advanced Punnett Squares
    An online module in which students learn about more difficult genetics problems, including linked genes and crossing over. Quantitatively students learn about marginal probabilities and chi-square...

    Keywords: geneticsProbabilityResources @ MathBenchonlinepunnett squareslinked genes

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    Mendelian Genetics, Probability, Pedigree, and Chi-Squared Statistics
    A lesson that requires students to work through a series of questions pertaining to the genetics of sickle cell disease and its relationship to malaria.

    Keywords: geneticsResources @ HHMI - BioInteractiveScientific ProcessStatistics and Mathmendelian inheritance

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    AIM-UP! Reading scientific literature module
    Designed to span 4 one-hour lectures, this module focuses upon developing the skill of thorough and critical reading of scientific literature.

    Keywords: Resources @ AIM-UP!primary literaturereadingscientific literatureliteraturereading comprehensioncritical reading

    1285

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    Drivers of Avian Local Species Richness: Continental-Scale Gradients, Regional Landscape, or Local Land Cover?
    Experiment included in Teaching Issues and Experiments in Ecology (TIEE) Volume 8

    Keywords: ecologyResources @ ESA - TIEEspecies richness

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    DNA Subway Learning Resources
    DNA Subway is a NIBLSE Recommended resource. This is a collection of learning resources associated with DNA Subway.

    Keywords: phylogeneticsIntroductoryLabbioinformaticsUndergraduateNIBLSEDNA BarcodingDNA sequenceBLASTmultiple sequence alignmentDNA SubwayInstructional SettingAudience LevelAdvancedActivity LengthExtended ProjectC1. Role of bioinformaticsC2. Computational conceptsC4. Bioinformatics toolsC5. Data retrievalC8. Data types

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    Teaching notes for "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America"
    This is an FMN participant modification of the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America,"...

    Keywords: ecologyLabfmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

    1990

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    Teaching Notes for Changes in Lake Ice: Ecosystem Response to Global Change
    This is an FMN participant modification of the TIEE module "Changes in Lake Ice: Ecosystem Responses to Global Change," authored by Robert Bohanan, Marianne Krasny, and Adam Welman in 2005.

    Keywords: ecologyLabfmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

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    Teaching Notes for Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    This is an FMN participant supplement for the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America," authored...

    Keywords: ecologyLabfmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

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    Teaching Notes for Global Temperature Change in the 21st Century
    This is an FMN participant supplement for the TIEE module "Global Temperature Change in the 21st Century," authored by Daniel R. Taub and Gillian S. Graham in 2011.

    Keywords: ecologyLabfmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

    1893

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    Investigating the footprint of climate change on phenology and ecological interactions in north-central North America
    This is an FMN participant modification of the TIEE module "Investigating the footprint of climate change on phenology and ecological interactions in north-central North America,"...

    Keywords: ecologyfmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthLess than 1 hour

    1877

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    261

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    Modeling Global Temperature Change in the 21st Century
    This is an FMN participant modification of the TIEE module "Global Temperature Change in the 21st Century," authored by Daniel R. Taub and Gillian S. Graham in 2011.

    Keywords: ecologyLabEcological Society of AmericafmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

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